Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUP43Q8NFH3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUP43Q8NFH3 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUP43Q8NFH3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.67■□□□□ 0.74
NUP43Q8NFH3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUP43Q8NFH3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUP43Q8NFH3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUP43Q8NFH3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUP43Q8NFH3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NUP43Q8NFH3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUP43Q8NFH3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUP43Q8NFH3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUP43Q8NFH3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NUP43Q8NFH3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NUP43Q8NFH3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUP43Q8NFH3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NUP43Q8NFH3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NUP43Q8NFH3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.66■□□□□ 0.74
NUP43Q8NFH3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
NUP43Q8NFH3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.66■□□□□ 0.74
NUP43Q8NFH3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUP43Q8NFH3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUP43Q8NFH3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP43Q8NFH3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP43Q8NFH3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP43Q8NFH3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP43Q8NFH3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
NUP43Q8NFH3 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.65■□□□□ 0.74
NUP43Q8NFH3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP43Q8NFH3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.65■□□□□ 0.74
NUP43Q8NFH3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP43Q8NFH3 AC079140.4-201ENST00000507448 529 ntBASIC19.65■□□□□ 0.74
NUP43Q8NFH3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.65■□□□□ 0.74
NUP43Q8NFH3 EEF1DP3-203ENST00000566025 782 ntBASIC19.65■□□□□ 0.74
NUP43Q8NFH3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP43Q8NFH3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP43Q8NFH3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.65■□□□□ 0.74
NUP43Q8NFH3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
NUP43Q8NFH3 AL049796.1-201ENST00000565336 1766 ntBASIC19.65■□□□□ 0.74
NUP43Q8NFH3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NUP43Q8NFH3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.64■□□□□ 0.74
NUP43Q8NFH3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NUP43Q8NFH3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.64■□□□□ 0.73
NUP43Q8NFH3 AC053503.5-201ENST00000601508 636 ntBASIC19.64■□□□□ 0.73
NUP43Q8NFH3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NUP43Q8NFH3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NUP43Q8NFH3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NUP43Q8NFH3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
NUP43Q8NFH3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
NUP43Q8NFH3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NUP43Q8NFH3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
NUP43Q8NFH3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUP43Q8NFH3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUP43Q8NFH3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
NUP43Q8NFH3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.63■□□□□ 0.73
NUP43Q8NFH3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NUP43Q8NFH3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NUP43Q8NFH3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.63■□□□□ 0.73
NUP43Q8NFH3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.63■□□□□ 0.73
NUP43Q8NFH3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NUP43Q8NFH3 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUP43Q8NFH3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.63■□□□□ 0.73
NUP43Q8NFH3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUP43Q8NFH3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUP43Q8NFH3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NUP43Q8NFH3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
NUP43Q8NFH3 AC019069.1-201ENST00000610008 1333 ntBASIC19.63■□□□□ 0.73
NUP43Q8NFH3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.63■□□□□ 0.73
NUP43Q8NFH3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
NUP43Q8NFH3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUP43Q8NFH3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUP43Q8NFH3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NUP43Q8NFH3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUP43Q8NFH3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.62■□□□□ 0.73
NUP43Q8NFH3 LINC02228-203ENST00000641970 1355 ntBASIC19.62■□□□□ 0.73
NUP43Q8NFH3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUP43Q8NFH3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NUP43Q8NFH3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
NUP43Q8NFH3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NUP43Q8NFH3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.62■□□□□ 0.73
NUP43Q8NFH3 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.62■□□□□ 0.73
NUP43Q8NFH3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUP43Q8NFH3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NUP43Q8NFH3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.61■□□□□ 0.73
NUP43Q8NFH3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
NUP43Q8NFH3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NUP43Q8NFH3 ZNRF2P3-201ENST00000424200 374 ntBASIC19.61■□□□□ 0.73
NUP43Q8NFH3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.61■□□□□ 0.73
NUP43Q8NFH3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
NUP43Q8NFH3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NUP43Q8NFH3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NUP43Q8NFH3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
NUP43Q8NFH3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
NUP43Q8NFH3 KRT87P-202ENST00000534226 1464 ntBASIC19.6■□□□□ 0.73
NUP43Q8NFH3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NUP43Q8NFH3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NUP43Q8NFH3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NUP43Q8NFH3 AC123595.1-201ENST00000440769 1046 ntBASIC19.6■□□□□ 0.73
NUP43Q8NFH3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.6■□□□□ 0.73
NUP43Q8NFH3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms