Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC26.02■■□□□ 1.76
RTL9Q8NET4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC26.02■■□□□ 1.76
RTL9Q8NET4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC26.02■■□□□ 1.76
RTL9Q8NET4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
RTL9Q8NET4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC26.01■■□□□ 1.75
RTL9Q8NET4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
RTL9Q8NET4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
RTL9Q8NET4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RTL9Q8NET4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RTL9Q8NET4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RTL9Q8NET4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RTL9Q8NET4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC26.01■■□□□ 1.75
RTL9Q8NET4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RTL9Q8NET4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC26.01■■□□□ 1.75
RTL9Q8NET4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RTL9Q8NET4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RTL9Q8NET4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RTL9Q8NET4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
RTL9Q8NET4 AC068473.5-201ENST00000616428 2072 ntBASIC26■■□□□ 1.75
RTL9Q8NET4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC26■■□□□ 1.75
RTL9Q8NET4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC26■■□□□ 1.75
RTL9Q8NET4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC26■■□□□ 1.75
RTL9Q8NET4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RTL9Q8NET4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC26■■□□□ 1.75
RTL9Q8NET4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC26■■□□□ 1.75
RTL9Q8NET4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC26■■□□□ 1.75
RTL9Q8NET4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RTL9Q8NET4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC26■■□□□ 1.75
RTL9Q8NET4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC26■■□□□ 1.75
RTL9Q8NET4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RTL9Q8NET4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC26■■□□□ 1.75
RTL9Q8NET4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RTL9Q8NET4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC26■■□□□ 1.75
RTL9Q8NET4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC25.99■■□□□ 1.75
RTL9Q8NET4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
RTL9Q8NET4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC25.99■■□□□ 1.75
RTL9Q8NET4 BX276092.2-201ENST00000417668 665 ntBASIC25.99■■□□□ 1.75
RTL9Q8NET4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RTL9Q8NET4 ITM2C-210ENST00000620962 501 ntBASIC25.99■■□□□ 1.75
RTL9Q8NET4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RTL9Q8NET4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RTL9Q8NET4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
RTL9Q8NET4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC25.99■■□□□ 1.75
RTL9Q8NET4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
RTL9Q8NET4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC25.98■■□□□ 1.75
RTL9Q8NET4 AC083880.1-201ENST00000608266 535 ntBASIC25.98■■□□□ 1.75
RTL9Q8NET4 FAM21FP-204ENST00000608637 956 ntBASIC25.98■■□□□ 1.75
RTL9Q8NET4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
RTL9Q8NET4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
RTL9Q8NET4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
RTL9Q8NET4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RTL9Q8NET4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RTL9Q8NET4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RTL9Q8NET4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
RTL9Q8NET4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RTL9Q8NET4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RTL9Q8NET4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC25.98■■□□□ 1.75
RTL9Q8NET4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
RTL9Q8NET4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC25.98■■□□□ 1.75
RTL9Q8NET4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC25.97■■□□□ 1.75
RTL9Q8NET4 PRORSD1P-201ENST00000295112 541 ntBASIC25.97■■□□□ 1.75
RTL9Q8NET4 RNA5SP413-201ENST00000516373 109 ntBASIC25.97■■□□□ 1.75
RTL9Q8NET4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
RTL9Q8NET4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC25.97■■□□□ 1.75
RTL9Q8NET4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC25.97■■□□□ 1.75
RTL9Q8NET4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RTL9Q8NET4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
RTL9Q8NET4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC25.97■■□□□ 1.75
RTL9Q8NET4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RTL9Q8NET4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
RTL9Q8NET4 C11orf96-202ENST00000528572 1834 ntBASIC25.96■■□□□ 1.75
RTL9Q8NET4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RTL9Q8NET4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC25.96■■□□□ 1.75
RTL9Q8NET4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC25.96■■□□□ 1.75
RTL9Q8NET4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC25.96■■□□□ 1.75
RTL9Q8NET4 AC245052.3-201ENST00000450182 901 ntBASIC25.96■■□□□ 1.75
RTL9Q8NET4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC25.96■■□□□ 1.75
RTL9Q8NET4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC25.96■■□□□ 1.75
RTL9Q8NET4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
RTL9Q8NET4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RTL9Q8NET4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RTL9Q8NET4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC25.96■■□□□ 1.75
RTL9Q8NET4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.75
RTL9Q8NET4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.75
RTL9Q8NET4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC25.95■■□□□ 1.75
RTL9Q8NET4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC25.95■■□□□ 1.75
RTL9Q8NET4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC25.95■■□□□ 1.74
RTL9Q8NET4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RTL9Q8NET4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC25.95■■□□□ 1.74
RTL9Q8NET4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RTL9Q8NET4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
RTL9Q8NET4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC25.95■■□□□ 1.74
RTL9Q8NET4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC25.95■■□□□ 1.74
RTL9Q8NET4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RTL9Q8NET4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RTL9Q8NET4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC25.94■■□□□ 1.74
RTL9Q8NET4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RTL9Q8NET4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RTL9Q8NET4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RTL9Q8NET4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms