Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SETD9Q8NE22 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SETD9Q8NE22 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SETD9Q8NE22 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SETD9Q8NE22 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SETD9Q8NE22 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.27■□□□□ 0.68
SETD9Q8NE22 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SETD9Q8NE22 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SETD9Q8NE22 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.27■□□□□ 0.68
SETD9Q8NE22 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SETD9Q8NE22 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.27■□□□□ 0.68
SETD9Q8NE22 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SETD9Q8NE22 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SETD9Q8NE22 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SETD9Q8NE22 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.27■□□□□ 0.68
SETD9Q8NE22 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SETD9Q8NE22 AC010980.1-201ENST00000587192 1142 ntBASIC19.27■□□□□ 0.68
SETD9Q8NE22 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SETD9Q8NE22 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.27■□□□□ 0.68
SETD9Q8NE22 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SETD9Q8NE22 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.27■□□□□ 0.67
SETD9Q8NE22 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SETD9Q8NE22 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SETD9Q8NE22 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.27■□□□□ 0.67
SETD9Q8NE22 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SETD9Q8NE22 AFG3L1P-217ENST00000557444 2447 ntBASIC19.26■□□□□ 0.67
SETD9Q8NE22 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.26■□□□□ 0.67
SETD9Q8NE22 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SETD9Q8NE22 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SETD9Q8NE22 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SETD9Q8NE22 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.26■□□□□ 0.67
SETD9Q8NE22 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SETD9Q8NE22 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.26■□□□□ 0.67
SETD9Q8NE22 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SETD9Q8NE22 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.26■□□□□ 0.67
SETD9Q8NE22 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.26■□□□□ 0.67
SETD9Q8NE22 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SETD9Q8NE22 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.25■□□□□ 0.67
SETD9Q8NE22 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.25■□□□□ 0.67
SETD9Q8NE22 AL391422.3-201ENST00000603791 2761 ntBASIC19.25■□□□□ 0.67
SETD9Q8NE22 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SETD9Q8NE22 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SETD9Q8NE22 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SETD9Q8NE22 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
SETD9Q8NE22 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SETD9Q8NE22 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.25■□□□□ 0.67
SETD9Q8NE22 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SETD9Q8NE22 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SETD9Q8NE22 AL034346.1-201ENST00000568244 1277 ntBASIC19.25■□□□□ 0.67
SETD9Q8NE22 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.25■□□□□ 0.67
SETD9Q8NE22 AC068587.7-201ENST00000641602 218 ntBASIC19.25■□□□□ 0.67
SETD9Q8NE22 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SETD9Q8NE22 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SETD9Q8NE22 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SETD9Q8NE22 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SETD9Q8NE22 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
SETD9Q8NE22 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.25■□□□□ 0.67
SETD9Q8NE22 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SETD9Q8NE22 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SETD9Q8NE22 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SETD9Q8NE22 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.24■□□□□ 0.67
SETD9Q8NE22 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.24■□□□□ 0.67
SETD9Q8NE22 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SETD9Q8NE22 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.24■□□□□ 0.67
SETD9Q8NE22 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SETD9Q8NE22 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.24■□□□□ 0.67
SETD9Q8NE22 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.24■□□□□ 0.67
SETD9Q8NE22 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.24■□□□□ 0.67
SETD9Q8NE22 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.24■□□□□ 0.67
SETD9Q8NE22 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.24■□□□□ 0.67
SETD9Q8NE22 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SETD9Q8NE22 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SETD9Q8NE22 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SETD9Q8NE22 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
SETD9Q8NE22 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.24■□□□□ 0.67
SETD9Q8NE22 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SETD9Q8NE22 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SETD9Q8NE22 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.24■□□□□ 0.67
SETD9Q8NE22 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.24■□□□□ 0.67
SETD9Q8NE22 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SETD9Q8NE22 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SETD9Q8NE22 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SETD9Q8NE22 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SETD9Q8NE22 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SETD9Q8NE22 PLK5-205ENST00000642079 1969 ntBASIC19.23■□□□□ 0.67
SETD9Q8NE22 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SETD9Q8NE22 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.23■□□□□ 0.67
SETD9Q8NE22 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.23■□□□□ 0.67
SETD9Q8NE22 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.23■□□□□ 0.67
SETD9Q8NE22 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.23■□□□□ 0.67
SETD9Q8NE22 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SETD9Q8NE22 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SETD9Q8NE22 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SETD9Q8NE22 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SETD9Q8NE22 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SETD9Q8NE22 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SETD9Q8NE22 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SETD9Q8NE22 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.23■□□□□ 0.67
SETD9Q8NE22 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SETD9Q8NE22 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms