Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRIML2Q8N7C3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIML2Q8N7C3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIML2Q8N7C3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIML2Q8N7C3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TRIML2Q8N7C3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.21■□□□□ 0.83
TRIML2Q8N7C3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.21■□□□□ 0.83
TRIML2Q8N7C3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.21■□□□□ 0.83
TRIML2Q8N7C3 Z98882.1-201ENST00000622160 2253 ntBASIC20.21■□□□□ 0.83
TRIML2Q8N7C3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIML2Q8N7C3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIML2Q8N7C3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIML2Q8N7C3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRIML2Q8N7C3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TRIML2Q8N7C3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIML2Q8N7C3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIML2Q8N7C3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIML2Q8N7C3 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.2■□□□□ 0.82
TRIML2Q8N7C3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRIML2Q8N7C3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIML2Q8N7C3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TRIML2Q8N7C3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIML2Q8N7C3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIML2Q8N7C3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.19■□□□□ 0.82
TRIML2Q8N7C3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIML2Q8N7C3 AC138932.1-201ENST00000534164 6830 ntBASIC20.19■□□□□ 0.82
TRIML2Q8N7C3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRIML2Q8N7C3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.19■□□□□ 0.82
TRIML2Q8N7C3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIML2Q8N7C3 SERBP1P1-201ENST00000396021 1160 ntBASIC20.19■□□□□ 0.82
TRIML2Q8N7C3 AC011298.3-201ENST00000615796 283 ntBASIC20.19■□□□□ 0.82
TRIML2Q8N7C3 AC136469.2-201ENST00000623944 1028 ntBASIC20.19■□□□□ 0.82
TRIML2Q8N7C3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
TRIML2Q8N7C3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRIML2Q8N7C3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.19■□□□□ 0.82
TRIML2Q8N7C3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRIML2Q8N7C3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIML2Q8N7C3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.18■□□□□ 0.82
TRIML2Q8N7C3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
TRIML2Q8N7C3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TRIML2Q8N7C3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIML2Q8N7C3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIML2Q8N7C3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIML2Q8N7C3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
TRIML2Q8N7C3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIML2Q8N7C3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
TRIML2Q8N7C3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIML2Q8N7C3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.18■□□□□ 0.82
TRIML2Q8N7C3 AC010525.1-201ENST00000585559 441 ntBASIC20.18■□□□□ 0.82
TRIML2Q8N7C3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.18■□□□□ 0.82
TRIML2Q8N7C3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIML2Q8N7C3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.18■□□□□ 0.82
TRIML2Q8N7C3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIML2Q8N7C3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIML2Q8N7C3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIML2Q8N7C3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIML2Q8N7C3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
TRIML2Q8N7C3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIML2Q8N7C3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
TRIML2Q8N7C3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIML2Q8N7C3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIML2Q8N7C3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIML2Q8N7C3 AP005435.1-201ENST00000529293 1178 ntBASIC20.17■□□□□ 0.82
TRIML2Q8N7C3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIML2Q8N7C3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIML2Q8N7C3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIML2Q8N7C3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
TRIML2Q8N7C3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIML2Q8N7C3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.17■□□□□ 0.82
TRIML2Q8N7C3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIML2Q8N7C3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.17■□□□□ 0.82
TRIML2Q8N7C3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIML2Q8N7C3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIML2Q8N7C3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIML2Q8N7C3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.16■□□□□ 0.82
TRIML2Q8N7C3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.16■□□□□ 0.82
TRIML2Q8N7C3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIML2Q8N7C3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIML2Q8N7C3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIML2Q8N7C3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIML2Q8N7C3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.16■□□□□ 0.82
TRIML2Q8N7C3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.16■□□□□ 0.82
TRIML2Q8N7C3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TRIML2Q8N7C3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIML2Q8N7C3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIML2Q8N7C3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
TRIML2Q8N7C3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIML2Q8N7C3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.15■□□□□ 0.82
TRIML2Q8N7C3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
TRIML2Q8N7C3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TRIML2Q8N7C3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TRIML2Q8N7C3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIML2Q8N7C3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIML2Q8N7C3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
TRIML2Q8N7C3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIML2Q8N7C3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIML2Q8N7C3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIML2Q8N7C3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.15■□□□□ 0.82
TRIML2Q8N7C3 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRIML2Q8N7C3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms