Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.6■□□□□ 0.25
TTC9CQ8N5M4 FEM1AP4-201ENST00000443167 1987 ntBASIC16.6■□□□□ 0.25
TTC9CQ8N5M4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TTC9CQ8N5M4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TTC9CQ8N5M4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.6■□□□□ 0.25
TTC9CQ8N5M4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TTC9CQ8N5M4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.6■□□□□ 0.25
TTC9CQ8N5M4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.6■□□□□ 0.25
TTC9CQ8N5M4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TTC9CQ8N5M4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TTC9CQ8N5M4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.6■□□□□ 0.25
TTC9CQ8N5M4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TTC9CQ8N5M4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.6■□□□□ 0.25
TTC9CQ8N5M4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TTC9CQ8N5M4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.6■□□□□ 0.25
TTC9CQ8N5M4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TTC9CQ8N5M4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
TTC9CQ8N5M4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TTC9CQ8N5M4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TTC9CQ8N5M4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TTC9CQ8N5M4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TTC9CQ8N5M4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TTC9CQ8N5M4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.6■□□□□ 0.25
TTC9CQ8N5M4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.6■□□□□ 0.25
TTC9CQ8N5M4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.59■□□□□ 0.25
TTC9CQ8N5M4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC9CQ8N5M4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
TTC9CQ8N5M4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC9CQ8N5M4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC16.59■□□□□ 0.25
TTC9CQ8N5M4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC16.59■□□□□ 0.25
TTC9CQ8N5M4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TTC9CQ8N5M4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC9CQ8N5M4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC9CQ8N5M4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC16.59■□□□□ 0.25
TTC9CQ8N5M4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TTC9CQ8N5M4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC9CQ8N5M4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC9CQ8N5M4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC16.59■□□□□ 0.25
TTC9CQ8N5M4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.59■□□□□ 0.25
TTC9CQ8N5M4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
TTC9CQ8N5M4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.59■□□□□ 0.25
TTC9CQ8N5M4 EEF1DP3-203ENST00000566025 782 ntBASIC16.59■□□□□ 0.25
TTC9CQ8N5M4 AC053503.5-201ENST00000601508 636 ntBASIC16.59■□□□□ 0.25
TTC9CQ8N5M4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.59■□□□□ 0.25
TTC9CQ8N5M4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.59■□□□□ 0.25
TTC9CQ8N5M4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TTC9CQ8N5M4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC9CQ8N5M4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TTC9CQ8N5M4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.59■□□□□ 0.25
TTC9CQ8N5M4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TTC9CQ8N5M4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TTC9CQ8N5M4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.58■□□□□ 0.25
TTC9CQ8N5M4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
TTC9CQ8N5M4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TTC9CQ8N5M4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TTC9CQ8N5M4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TTC9CQ8N5M4 AC123595.1-201ENST00000440769 1046 ntBASIC16.58■□□□□ 0.24
TTC9CQ8N5M4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TTC9CQ8N5M4 LINC02228-203ENST00000641970 1355 ntBASIC16.58■□□□□ 0.24
TTC9CQ8N5M4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TTC9CQ8N5M4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TTC9CQ8N5M4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TTC9CQ8N5M4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TTC9CQ8N5M4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TTC9CQ8N5M4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.58■□□□□ 0.24
TTC9CQ8N5M4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.58■□□□□ 0.24
TTC9CQ8N5M4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TTC9CQ8N5M4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TTC9CQ8N5M4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TTC9CQ8N5M4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
TTC9CQ8N5M4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
TTC9CQ8N5M4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TTC9CQ8N5M4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TTC9CQ8N5M4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.57■□□□□ 0.24
TTC9CQ8N5M4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TTC9CQ8N5M4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TTC9CQ8N5M4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TTC9CQ8N5M4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TTC9CQ8N5M4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TTC9CQ8N5M4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TTC9CQ8N5M4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TTC9CQ8N5M4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.57■□□□□ 0.24
TTC9CQ8N5M4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.57■□□□□ 0.24
TTC9CQ8N5M4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TTC9CQ8N5M4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TTC9CQ8N5M4 AC079140.4-201ENST00000507448 529 ntBASIC16.57■□□□□ 0.24
TTC9CQ8N5M4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.57■□□□□ 0.24
TTC9CQ8N5M4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.57■□□□□ 0.24
TTC9CQ8N5M4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TTC9CQ8N5M4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TTC9CQ8N5M4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TTC9CQ8N5M4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TTC9CQ8N5M4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TTC9CQ8N5M4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TTC9CQ8N5M4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TTC9CQ8N5M4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TTC9CQ8N5M4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TTC9CQ8N5M4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TTC9CQ8N5M4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TTC9CQ8N5M4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms