Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIX5Q8N196 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
SIX5Q8N196 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SIX5Q8N196 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIX5Q8N196 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
SIX5Q8N196 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.59■■□□□ 1.05
SIX5Q8N196 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIX5Q8N196 KRT16P2-201ENST00000414673 1423 ntBASIC21.59■■□□□ 1.05
SIX5Q8N196 AC211429.1-201ENST00000415277 523 ntBASIC21.59■■□□□ 1.05
SIX5Q8N196 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.59■■□□□ 1.05
SIX5Q8N196 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.59■■□□□ 1.05
SIX5Q8N196 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.59■■□□□ 1.05
SIX5Q8N196 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.59■■□□□ 1.05
SIX5Q8N196 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SIX5Q8N196 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.59■■□□□ 1.05
SIX5Q8N196 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
SIX5Q8N196 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIX5Q8N196 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.59■■□□□ 1.05
SIX5Q8N196 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIX5Q8N196 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SIX5Q8N196 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.59■■□□□ 1.05
SIX5Q8N196 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SIX5Q8N196 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SIX5Q8N196 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SIX5Q8N196 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SIX5Q8N196 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.58■■□□□ 1.05
SIX5Q8N196 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.58■■□□□ 1.05
SIX5Q8N196 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SIX5Q8N196 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SIX5Q8N196 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
SIX5Q8N196 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
SIX5Q8N196 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.57■■□□□ 1.04
SIX5Q8N196 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
SIX5Q8N196 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SIX5Q8N196 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.57■■□□□ 1.04
SIX5Q8N196 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.57■■□□□ 1.04
SIX5Q8N196 AC060766.5-201ENST00000590539 871 ntBASIC21.57■■□□□ 1.04
SIX5Q8N196 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
SIX5Q8N196 AC010331.1-201ENST00000611423 582 ntBASIC21.57■■□□□ 1.04
SIX5Q8N196 REXO1L12P-201ENST00000622156 912 ntBASIC21.57■■□□□ 1.04
SIX5Q8N196 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
SIX5Q8N196 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
SIX5Q8N196 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SIX5Q8N196 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
SIX5Q8N196 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SIX5Q8N196 KRT17P1-201ENST00000399211 1546 ntBASIC21.56■■□□□ 1.04
SIX5Q8N196 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.56■■□□□ 1.04
SIX5Q8N196 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SIX5Q8N196 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.56■■□□□ 1.04
SIX5Q8N196 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
SIX5Q8N196 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.56■■□□□ 1.04
SIX5Q8N196 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.56■■□□□ 1.04
SIX5Q8N196 SNORA78-201ENST00000459373 127 ntBASIC21.56■■□□□ 1.04
SIX5Q8N196 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
SIX5Q8N196 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.56■■□□□ 1.04
SIX5Q8N196 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.56■■□□□ 1.04
SIX5Q8N196 Z99916.2-201ENST00000604037 246 ntBASIC21.56■■□□□ 1.04
SIX5Q8N196 AC243732.1-201ENST00000612648 864 ntBASIC21.56■■□□□ 1.04
SIX5Q8N196 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.56■■□□□ 1.04
SIX5Q8N196 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.56■■□□□ 1.04
SIX5Q8N196 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SIX5Q8N196 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.56■■□□□ 1.04
SIX5Q8N196 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.55■■□□□ 1.04
SIX5Q8N196 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SIX5Q8N196 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
SIX5Q8N196 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.55■■□□□ 1.04
SIX5Q8N196 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
SIX5Q8N196 AL355472.2-201ENST00000422958 438 ntBASIC21.55■■□□□ 1.04
SIX5Q8N196 CYP2T3P-201ENST00000601990 817 ntBASIC21.55■■□□□ 1.04
SIX5Q8N196 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.55■■□□□ 1.04
SIX5Q8N196 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SIX5Q8N196 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SIX5Q8N196 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SIX5Q8N196 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.54■■□□□ 1.04
SIX5Q8N196 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.54■■□□□ 1.04
SIX5Q8N196 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.54■■□□□ 1.04
SIX5Q8N196 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.54■■□□□ 1.04
SIX5Q8N196 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SIX5Q8N196 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.54■■□□□ 1.04
SIX5Q8N196 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
SIX5Q8N196 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
SIX5Q8N196 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.53■■□□□ 1.04
SIX5Q8N196 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.53■■□□□ 1.04
SIX5Q8N196 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SIX5Q8N196 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SIX5Q8N196 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.53■■□□□ 1.04
SIX5Q8N196 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SIX5Q8N196 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SIX5Q8N196 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.53■■□□□ 1.04
SIX5Q8N196 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.53■■□□□ 1.04
SIX5Q8N196 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.53■■□□□ 1.04
SIX5Q8N196 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.53■■□□□ 1.04
SIX5Q8N196 HLA-B-256ENST00000639848 1089 ntBASIC21.53■■□□□ 1.04
SIX5Q8N196 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SIX5Q8N196 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
SIX5Q8N196 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SIX5Q8N196 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.52■■□□□ 1.04
SIX5Q8N196 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.52■■□□□ 1.04
SIX5Q8N196 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.52■■□□□ 1.04
SIX5Q8N196 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms