Protein–RNA interactions for Protein: Q8N0S2

SYCE1, Synaptonemal complex central element protein 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE1Q8N0S2 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SYCE1Q8N0S2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
SYCE1Q8N0S2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
SYCE1Q8N0S2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SYCE1Q8N0S2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.19■■□□□ 1.14
SYCE1Q8N0S2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.19■■□□□ 1.14
SYCE1Q8N0S2 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC22.19■■□□□ 1.14
SYCE1Q8N0S2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.18■■□□□ 1.14
SYCE1Q8N0S2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC22.18■■□□□ 1.14
SYCE1Q8N0S2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SYCE1Q8N0S2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
SYCE1Q8N0S2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.18■■□□□ 1.14
SYCE1Q8N0S2 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
SYCE1Q8N0S2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.18■■□□□ 1.14
SYCE1Q8N0S2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SYCE1Q8N0S2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SYCE1Q8N0S2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.18■■□□□ 1.14
SYCE1Q8N0S2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.18■■□□□ 1.14
SYCE1Q8N0S2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SYCE1Q8N0S2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.18■■□□□ 1.14
SYCE1Q8N0S2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.18■■□□□ 1.14
SYCE1Q8N0S2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SYCE1Q8N0S2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SYCE1Q8N0S2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC22.18■■□□□ 1.14
SYCE1Q8N0S2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SYCE1Q8N0S2 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SYCE1Q8N0S2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
SYCE1Q8N0S2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SYCE1Q8N0S2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SYCE1Q8N0S2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SYCE1Q8N0S2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SYCE1Q8N0S2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC22.17■■□□□ 1.14
SYCE1Q8N0S2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SYCE1Q8N0S2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SYCE1Q8N0S2 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SYCE1Q8N0S2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
SYCE1Q8N0S2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SYCE1Q8N0S2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
SYCE1Q8N0S2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SYCE1Q8N0S2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SYCE1Q8N0S2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SYCE1Q8N0S2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
SYCE1Q8N0S2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SYCE1Q8N0S2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SYCE1Q8N0S2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SYCE1Q8N0S2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
SYCE1Q8N0S2 ME2-216ENST00000639850 2331 ntTSL 5 BASIC22.17■■□□□ 1.14
SYCE1Q8N0S2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC22.16■■□□□ 1.14
SYCE1Q8N0S2 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC22.16■■□□□ 1.14
SYCE1Q8N0S2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SYCE1Q8N0S2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SYCE1Q8N0S2 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
SYCE1Q8N0S2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.16■■□□□ 1.14
SYCE1Q8N0S2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.16■■□□□ 1.14
SYCE1Q8N0S2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
SYCE1Q8N0S2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SYCE1Q8N0S2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SYCE1Q8N0S2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SYCE1Q8N0S2 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
SYCE1Q8N0S2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC22.15■■□□□ 1.14
SYCE1Q8N0S2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SYCE1Q8N0S2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SYCE1Q8N0S2 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SYCE1Q8N0S2 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
SYCE1Q8N0S2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
SYCE1Q8N0S2 BX842568.3-201ENST00000418104 571 ntBASIC22.15■■□□□ 1.14
SYCE1Q8N0S2 AC131281.2-201ENST00000520478 145 ntBASIC22.15■■□□□ 1.14
SYCE1Q8N0S2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.15■■□□□ 1.14
SYCE1Q8N0S2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SYCE1Q8N0S2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SYCE1Q8N0S2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
SYCE1Q8N0S2 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
SYCE1Q8N0S2 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SYCE1Q8N0S2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.15■■□□□ 1.14
SYCE1Q8N0S2 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SYCE1Q8N0S2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.14■■□□□ 1.14
SYCE1Q8N0S2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.14■■□□□ 1.14
SYCE1Q8N0S2 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
SYCE1Q8N0S2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SYCE1Q8N0S2 GABARAPL3-202ENST00000624044 1851 ntBASIC22.14■■□□□ 1.13
SYCE1Q8N0S2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.14■■□□□ 1.13
SYCE1Q8N0S2 AC133561.4-201ENST00000566112 224 ntBASIC22.14■■□□□ 1.13
SYCE1Q8N0S2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.14■■□□□ 1.13
SYCE1Q8N0S2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.14■■□□□ 1.13
SYCE1Q8N0S2 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SYCE1Q8N0S2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.13
SYCE1Q8N0S2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC22.14■■□□□ 1.13
SYCE1Q8N0S2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SYCE1Q8N0S2 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
SYCE1Q8N0S2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SYCE1Q8N0S2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SYCE1Q8N0S2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
SYCE1Q8N0S2 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
SYCE1Q8N0S2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SYCE1Q8N0S2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SYCE1Q8N0S2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.13■■□□□ 1.13
SYCE1Q8N0S2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.13■■□□□ 1.13
SYCE1Q8N0S2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SYCE1Q8N0S2 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SYCE1Q8N0S2 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms