Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VRK2Q86Y07 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.43■□□□□ 0.7
VRK2Q86Y07 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VRK2Q86Y07 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VRK2Q86Y07 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.43■□□□□ 0.7
VRK2Q86Y07 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VRK2Q86Y07 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.43■□□□□ 0.7
VRK2Q86Y07 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
VRK2Q86Y07 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VRK2Q86Y07 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VRK2Q86Y07 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VRK2Q86Y07 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VRK2Q86Y07 AC142381.2-201ENST00000566120 298 ntBASIC19.42■□□□□ 0.7
VRK2Q86Y07 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VRK2Q86Y07 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.42■□□□□ 0.7
VRK2Q86Y07 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.42■□□□□ 0.7
VRK2Q86Y07 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
VRK2Q86Y07 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
VRK2Q86Y07 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VRK2Q86Y07 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
VRK2Q86Y07 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
VRK2Q86Y07 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VRK2Q86Y07 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VRK2Q86Y07 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
VRK2Q86Y07 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VRK2Q86Y07 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.41■□□□□ 0.7
VRK2Q86Y07 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VRK2Q86Y07 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.41■□□□□ 0.7
VRK2Q86Y07 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.41■□□□□ 0.7
VRK2Q86Y07 AC012414.1-201ENST00000556676 535 ntBASIC19.41■□□□□ 0.7
VRK2Q86Y07 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.41■□□□□ 0.7
VRK2Q86Y07 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
VRK2Q86Y07 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.41■□□□□ 0.7
VRK2Q86Y07 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
VRK2Q86Y07 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VRK2Q86Y07 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VRK2Q86Y07 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VRK2Q86Y07 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.4■□□□□ 0.7
VRK2Q86Y07 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VRK2Q86Y07 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VRK2Q86Y07 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VRK2Q86Y07 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
VRK2Q86Y07 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VRK2Q86Y07 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VRK2Q86Y07 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VRK2Q86Y07 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.4■□□□□ 0.7
VRK2Q86Y07 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VRK2Q86Y07 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.4■□□□□ 0.7
VRK2Q86Y07 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VRK2Q86Y07 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VRK2Q86Y07 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VRK2Q86Y07 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VRK2Q86Y07 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.4■□□□□ 0.7
VRK2Q86Y07 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
VRK2Q86Y07 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VRK2Q86Y07 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
VRK2Q86Y07 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
VRK2Q86Y07 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.39■□□□□ 0.7
VRK2Q86Y07 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
VRK2Q86Y07 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
VRK2Q86Y07 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VRK2Q86Y07 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VRK2Q86Y07 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VRK2Q86Y07 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.39■□□□□ 0.69
VRK2Q86Y07 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.39■□□□□ 0.69
VRK2Q86Y07 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.39■□□□□ 0.69
VRK2Q86Y07 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.39■□□□□ 0.69
VRK2Q86Y07 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.39■□□□□ 0.69
VRK2Q86Y07 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VRK2Q86Y07 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VRK2Q86Y07 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VRK2Q86Y07 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VRK2Q86Y07 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.39■□□□□ 0.69
VRK2Q86Y07 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
VRK2Q86Y07 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VRK2Q86Y07 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
VRK2Q86Y07 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VRK2Q86Y07 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VRK2Q86Y07 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
VRK2Q86Y07 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VRK2Q86Y07 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VRK2Q86Y07 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VRK2Q86Y07 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
VRK2Q86Y07 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VRK2Q86Y07 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VRK2Q86Y07 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.38■□□□□ 0.69
VRK2Q86Y07 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VRK2Q86Y07 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VRK2Q86Y07 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.38■□□□□ 0.69
VRK2Q86Y07 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.38■□□□□ 0.69
VRK2Q86Y07 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VRK2Q86Y07 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.38■□□□□ 0.69
VRK2Q86Y07 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.38■□□□□ 0.69
VRK2Q86Y07 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.38■□□□□ 0.69
VRK2Q86Y07 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.38■□□□□ 0.69
VRK2Q86Y07 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.38■□□□□ 0.69
VRK2Q86Y07 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.38■□□□□ 0.69
VRK2Q86Y07 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.38■□□□□ 0.69
VRK2Q86Y07 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.38■□□□□ 0.69
VRK2Q86Y07 MIR6084-201ENST00000622012 110 ntBASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms