Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LDB1Q86U70 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
LDB1Q86U70 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LDB1Q86U70 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.97■□□□□ 0.95
LDB1Q86U70 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LDB1Q86U70 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
LDB1Q86U70 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LDB1Q86U70 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LDB1Q86U70 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
LDB1Q86U70 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LDB1Q86U70 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LDB1Q86U70 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.96■□□□□ 0.95
LDB1Q86U70 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LDB1Q86U70 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.96■□□□□ 0.95
LDB1Q86U70 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
LDB1Q86U70 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LDB1Q86U70 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LDB1Q86U70 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LDB1Q86U70 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
LDB1Q86U70 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LDB1Q86U70 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
LDB1Q86U70 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.96■□□□□ 0.95
LDB1Q86U70 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.96■□□□□ 0.95
LDB1Q86U70 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
LDB1Q86U70 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LDB1Q86U70 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.96■□□□□ 0.95
LDB1Q86U70 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LDB1Q86U70 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
LDB1Q86U70 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.95■□□□□ 0.94
LDB1Q86U70 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
LDB1Q86U70 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LDB1Q86U70 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.95■□□□□ 0.94
LDB1Q86U70 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.95■□□□□ 0.94
LDB1Q86U70 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.95■□□□□ 0.94
LDB1Q86U70 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LDB1Q86U70 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LDB1Q86U70 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.95■□□□□ 0.94
LDB1Q86U70 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LDB1Q86U70 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LDB1Q86U70 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LDB1Q86U70 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LDB1Q86U70 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LDB1Q86U70 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.94■□□□□ 0.94
LDB1Q86U70 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LDB1Q86U70 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LDB1Q86U70 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
LDB1Q86U70 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LDB1Q86U70 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LDB1Q86U70 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LDB1Q86U70 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.94■□□□□ 0.94
LDB1Q86U70 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.94■□□□□ 0.94
LDB1Q86U70 AC079140.4-201ENST00000507448 529 ntBASIC20.94■□□□□ 0.94
LDB1Q86U70 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.94■□□□□ 0.94
LDB1Q86U70 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
LDB1Q86U70 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
LDB1Q86U70 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LDB1Q86U70 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LDB1Q86U70 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LDB1Q86U70 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.93■□□□□ 0.94
LDB1Q86U70 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LDB1Q86U70 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.93■□□□□ 0.94
LDB1Q86U70 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LDB1Q86U70 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LDB1Q86U70 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
LDB1Q86U70 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.93■□□□□ 0.94
LDB1Q86U70 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.93■□□□□ 0.94
LDB1Q86U70 EEF1DP3-203ENST00000566025 782 ntBASIC20.93■□□□□ 0.94
LDB1Q86U70 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.93■□□□□ 0.94
LDB1Q86U70 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.93■□□□□ 0.94
LDB1Q86U70 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LDB1Q86U70 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LDB1Q86U70 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
LDB1Q86U70 LINC02228-203ENST00000641970 1355 ntBASIC20.93■□□□□ 0.94
LDB1Q86U70 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.93■□□□□ 0.94
LDB1Q86U70 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LDB1Q86U70 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LDB1Q86U70 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
LDB1Q86U70 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LDB1Q86U70 AL049796.1-201ENST00000565336 1766 ntBASIC20.92■□□□□ 0.94
LDB1Q86U70 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LDB1Q86U70 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.92■□□□□ 0.94
LDB1Q86U70 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.92■□□□□ 0.94
LDB1Q86U70 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LDB1Q86U70 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LDB1Q86U70 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
LDB1Q86U70 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LDB1Q86U70 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.92■□□□□ 0.94
LDB1Q86U70 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
LDB1Q86U70 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
LDB1Q86U70 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LDB1Q86U70 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.92■□□□□ 0.94
LDB1Q86U70 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
LDB1Q86U70 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LDB1Q86U70 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LDB1Q86U70 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LDB1Q86U70 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LDB1Q86U70 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LDB1Q86U70 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LDB1Q86U70 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
LDB1Q86U70 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms