Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 14e-7■■□□□ 13
PABPN1Q86U42 MYBBP1A-202ENST00000381556 4104 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.324e-7■■□□□ 13
PABPN1Q86U42 MYBBP1A-207ENST00000573116 3795 ntAPPRIS ALT2 TSL 1 (best)15.57■□□□□ 0.084e-7■■□□□ 13
PABPN1Q86U42 PSME2-218ENST00000630027 185 ntTSL 3 BASIC27.25■■□□□ 1.955e-7■■□□□ 13
PABPN1Q86U42 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC26.81■■□□□ 1.884e-7■■□□□ 13
PABPN1Q86U42 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC37.12■■■■□ 3.539e-8■■□□□ 13
PABPN1Q86U42 AKT2-203ENST00000391844 1795 ntTSL 1 (best)46.29■■■■■ 54e-7■■□□□ 13
PABPN1Q86U42 AKT2-240ENST00000584288 1706 ntTSL 235.04■■■■□ 3.24e-7■■□□□ 13
PABPN1Q86U42 AKT2-228ENST00000537834 1402 ntTSL 233.45■■■□□ 2.944e-7■■□□□ 13
PABPN1Q86U42 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC32.92■■■□□ 2.864e-7■■□□□ 13
PABPN1Q86U42 AKT2-221ENST00000487537 954 ntTSL 232.72■■■□□ 2.834e-7■■□□□ 13
PABPN1Q86U42 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC31.99■■■□□ 2.714e-7■■□□□ 13
PABPN1Q86U42 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.674e-7■■□□□ 13
PABPN1Q86U42 AKT2-212ENST00000441941 974 ntTSL 430.96■■■□□ 2.554e-7■■□□□ 13
PABPN1Q86U42 AKT2-207ENST00000416362 974 ntTSL 529.4■■■□□ 2.34e-7■■□□□ 13
PABPN1Q86U42 AKT2-205ENST00000392037 681 ntTSL 228.88■■■□□ 2.214e-7■■□□□ 13
PABPN1Q86U42 AKT2-213ENST00000452077 577 ntTSL 325.02■■□□□ 1.64e-7■■□□□ 13
PABPN1Q86U42 AKT2-229ENST00000578123 564 ntTSL 423.01■■□□□ 1.274e-7■■□□□ 13
PABPN1Q86U42 AKT2-224ENST00000492463 737 ntTSL 522.43■■□□□ 1.184e-7■■□□□ 13
PABPN1Q86U42 AKT2-241ENST00000596634 583 ntTSL 522■■□□□ 1.114e-7■■□□□ 13
PABPN1Q86U42 AKT2-201ENST00000311278 1393 ntTSL 1 (best) BASIC21.89■■□□□ 1.14e-7■■□□□ 13
PABPN1Q86U42 AKT2-223ENST00000491778 573 ntTSL 420.85■□□□□ 0.934e-7■■□□□ 13
PABPN1Q86U42 AKT2-242ENST00000601166 554 ntTSL 520.3■□□□□ 0.844e-7■■□□□ 13
PABPN1Q86U42 AKT2-219ENST00000486368 606 ntTSL 420.11■□□□□ 0.814e-7■■□□□ 13
PABPN1Q86U42 AKT2-233ENST00000578975 3337 nt18.92■□□□□ 0.624e-7■■□□□ 13
PABPN1Q86U42 AKT2-216ENST00000476266 3309 ntTSL 518.53■□□□□ 0.564e-7■■□□□ 13
PABPN1Q86U42 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC44.77■■■■■ 4.761e-13■■□□□ 13
PABPN1Q86U42 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC25.1■■□□□ 1.611e-13■■□□□ 13
PABPN1Q86U42 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC23.45■■□□□ 1.341e-13■■□□□ 13
PABPN1Q86U42 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.271e-13■■□□□ 13
PABPN1Q86U42 NEDD4L-224ENST00000588712 2066 ntTSL 219.03■□□□□ 0.641e-13■■□□□ 13
PABPN1Q86U42 NEDD4L-201ENST00000256830 2920 ntTSL 5 BASIC15.2■□□□□ 0.021e-13■■□□□ 13
PABPN1Q86U42 NEDD4L-206ENST00000431212 3338 ntTSL 1 (best) BASIC14.72□□□□□ -0.051e-13■■□□□ 13
PABPN1Q86U42 NEDD4L-203ENST00000357895 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.211e-13■■□□□ 13
PABPN1Q86U42 NEDD4L-214ENST00000586263 3347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.391e-13■■□□□ 13
PABPN1Q86U42 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC12.19□□□□□ -0.461e-13■■□□□ 13
PABPN1Q86U42 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.922e-7■■□□□ 13
PABPN1Q86U42 SSBP4-205ENST00000598159 747 ntTSL 346.89■■■■■ 5.11e-7■■□□□ 13
PABPN1Q86U42 SSBP4-204ENST00000597724 865 ntTSL 533.24■■■□□ 2.911e-7■■□□□ 13
PABPN1Q86U42 AMPD2-211ENST00000479919 690 ntTSL 324.69■■□□□ 1.541e-6■■□□□ 13
PABPN1Q86U42 ABCD4-210ENST00000481348 1177 ntTSL 527.53■■■□□ 22e-6■■□□□ 13
PABPN1Q86U42 ABCD4-223ENST00000555904 582 ntTSL 323.46■■□□□ 1.352e-6■■□□□ 13
PABPN1Q86U42 ABCD4-211ENST00000481935 2336 ntTSL 523.41■■□□□ 1.342e-6■■□□□ 13
PABPN1Q86U42 ABCD4-201ENST00000356924 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.712e-6■■□□□ 13
PABPN1Q86U42 VIL1-202ENST00000392114 1968 ntTSL 2 BASIC21.33■■□□□ 1.013e-7■■□□□ 13
PABPN1Q86U42 VIL1-201ENST00000248444 6531 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.013e-7■■□□□ 13
PABPN1Q86U42 ARHGEF10L-208ENST00000482892 539 ntTSL 321.26■□□□□ 0.992e-6■■□□□ 13
PABPN1Q86U42 ACSS2-220ENST00000491533 933 ntTSL 523.76■■□□□ 1.392e-7■■□□□ 13
PABPN1Q86U42 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC53.97■■■■■ 6.232e-8■■□□□ 13
PABPN1Q86U42 THRAP3-201ENST00000354618 4432 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.38e-7■■□□□ 13
PABPN1Q86U42 PCYT2-218ENST00000576343 1006 ntTSL 547.82■■■■■ 5.251e-7■■□□□ 13
PABPN1Q86U42 PFKL-206ENST00000467315 1947 ntTSL 234.03■■■■□ 3.045e-7■■□□□ 13
PABPN1Q86U42 PFKL-211ENST00000498841 3122 ntTSL 1 (best)27.23■■□□□ 1.955e-7■■□□□ 13
PABPN1Q86U42 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC46.91■■■■■ 5.13e-10■■□□□ 13
PABPN1Q86U42 CS-226ENST00000551430 751 ntTSL 342.12■■■■■ 4.337e-9■■□□□ 13
PABPN1Q86U42 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC36.49■■■■□ 3.436e-7■■□□□ 13
PABPN1Q86U42 SRRM2-217ENST00000573692 459 ntTSL 332.78■■■□□ 2.843e-10■■□□□ 13
PABPN1Q86U42 SRRM2-218ENST00000574331 1759 ntTSL 231.45■■■□□ 2.623e-10■■□□□ 13
PABPN1Q86U42 CS-231ENST00000552222 555 ntTSL 430.52■■■□□ 2.487e-9■■□□□ 13
PABPN1Q86U42 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.947e-9■■□□□ 13
PABPN1Q86U42 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC22.77■■□□□ 1.247e-9■■□□□ 13
PABPN1Q86U42 SRRM2-202ENST00000570539 431 ntTSL 221.29■■□□□ 13e-10■■□□□ 13
PABPN1Q86U42 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.883e-10■■□□□ 13
PABPN1Q86U42 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.857e-9■■□□□ 13
PABPN1Q86U42 CS-218ENST00000550159 646 ntTSL 519.68■□□□□ 0.747e-9■■□□□ 13
PABPN1Q86U42 FADS2-213ENST00000523235 5073 ntTSL 219.64■□□□□ 0.737e-9■■□□□ 13
PABPN1Q86U42 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC17.24■□□□□ 0.357e-9■■□□□ 13
PABPN1Q86U42 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.177e-9■■□□□ 13
PABPN1Q86U42 CS-205ENST00000546891 911 ntTSL 215.75■□□□□ 0.113e-7■■□□□ 13
PABPN1Q86U42 HECTD1-208ENST00000554882 3748 ntTSL 59.78□□□□□ -0.847e-9■■□□□ 13
PABPN1Q86U42 HECTD1-210ENST00000555843 4281 ntTSL 27.38□□□□□ -1.237e-9■■□□□ 13
PABPN1Q86U42 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC35.77■■■■□ 3.322e-6■■□□□ 13
PABPN1Q86U42 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.511e-6■■□□□ 13
PABPN1Q86U42 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC49.88■■■■■ 5.589e-8■■□□□ 13
PABPN1Q86U42 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC39.76■■■■□ 3.969e-8■■□□□ 13
PABPN1Q86U42 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.822e-9■■□□□ 12.9
PABPN1Q86U42 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC39.74■■■■□ 3.953e-6■■□□□ 12.9
PABPN1Q86U42 FLOT1-212ENST00000487376 1583 ntTSL 534.5■■■■□ 3.113e-6■■□□□ 12.9
PABPN1Q86U42 ARHGEF1-223ENST00000617585 737 ntTSL 245.56■■■■■ 4.882e-6■■□□□ 12.9
PABPN1Q86U42 MEGF6-204ENST00000475790 883 ntTSL 344.05■■■■■ 4.642e-6■■□□□ 12.9
PABPN1Q86U42 ARHGEF1-217ENST00000598812 588 ntTSL 540.22■■■■■ 4.032e-6■■□□□ 12.9
PABPN1Q86U42 MEGF6-206ENST00000491842 743 ntTSL 537.58■■■■□ 3.612e-6■■□□□ 12.9
PABPN1Q86U42 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC33.27■■■□□ 2.922e-6■■□□□ 12.9
PABPN1Q86U42 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.72e-6■■□□□ 12.9
PABPN1Q86U42 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC30.6■■■□□ 2.492e-6■■□□□ 12.9
PABPN1Q86U42 AC135050.2-201ENST00000533518 2362 ntTSL 1 (best)26.92■■□□□ 1.92e-6■■□□□ 12.9
PABPN1Q86U42 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC26.33■■□□□ 1.82e-6■■□□□ 12.9
PABPN1Q86U42 MAPK13-205ENST00000490334 649 ntTSL 525.04■■□□□ 1.62e-6■■□□□ 12.9
PABPN1Q86U42 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC23.14■■□□□ 1.32e-6■■□□□ 12.9
PABPN1Q86U42 MEGF6-205ENST00000485002 4705 ntTSL 522.84■■□□□ 1.252e-6■■□□□ 12.9
PABPN1Q86U42 PRSS53-202ENST00000486499 5489 ntTSL 222.24■■□□□ 1.152e-6■■□□□ 12.9
PABPN1Q86U42 FER1L4-210ENST00000615531 5998 ntBASIC22.23■■□□□ 1.152e-6■■□□□ 12.9
PABPN1Q86U42 FER1L4-212ENST00000616711 3353 ntTSL 519.92■□□□□ 0.782e-6■■□□□ 12.9
PABPN1Q86U42 FER1L4-208ENST00000611673 3860 ntTSL 2 BASIC19.63■□□□□ 0.732e-6■■□□□ 12.9
PABPN1Q86U42 FER1L4-209ENST00000613061 3710 ntTSL 519.39■□□□□ 0.692e-6■■□□□ 12.9
PABPN1Q86U42 NPEPPS-201ENST00000322157 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.22e-6■■□□□ 12.9
PABPN1Q86U42 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC15.14■□□□□ 0.012e-6■■□□□ 12.9
PABPN1Q86U42 RPARP-AS1-208ENST00000598368 2453 nt12.98□□□□□ -0.332e-6■■□□□ 12.9
PABPN1Q86U42 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.932e-6■■□□□ 12.9
PABPN1Q86U42 QARS-252ENST00000637908 637 ntTSL 528.94■■■□□ 2.221e-6■■□□□ 12.9
Retrieved 100 of 8,254 protein–RNA pairs in 283 ms