Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.77■■□□□ 1.4
SHC4Q6S5L8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SHC4Q6S5L8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SHC4Q6S5L8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
SHC4Q6S5L8 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC23.77■■□□□ 1.4
SHC4Q6S5L8 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SHC4Q6S5L8 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SHC4Q6S5L8 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.76■■□□□ 1.39
SHC4Q6S5L8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.76■■□□□ 1.39
SHC4Q6S5L8 TPRG1LP1-201ENST00000598702 760 ntBASIC23.76■■□□□ 1.39
SHC4Q6S5L8 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
SHC4Q6S5L8 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SHC4Q6S5L8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
SHC4Q6S5L8 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.76■■□□□ 1.39
SHC4Q6S5L8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SHC4Q6S5L8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SHC4Q6S5L8 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SHC4Q6S5L8 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SHC4Q6S5L8 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.76■■□□□ 1.39
SHC4Q6S5L8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.75■■□□□ 1.39
SHC4Q6S5L8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SHC4Q6S5L8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SHC4Q6S5L8 PLK5-205ENST00000642079 1969 ntBASIC23.75■■□□□ 1.39
SHC4Q6S5L8 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SHC4Q6S5L8 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.75■■□□□ 1.39
SHC4Q6S5L8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.75■■□□□ 1.39
SHC4Q6S5L8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.75■■□□□ 1.39
SHC4Q6S5L8 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.75■■□□□ 1.39
SHC4Q6S5L8 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC23.75■■□□□ 1.39
SHC4Q6S5L8 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.75■■□□□ 1.39
SHC4Q6S5L8 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.75■■□□□ 1.39
SHC4Q6S5L8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SHC4Q6S5L8 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.75■■□□□ 1.39
SHC4Q6S5L8 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC23.74■■□□□ 1.39
SHC4Q6S5L8 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
SHC4Q6S5L8 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
SHC4Q6S5L8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SHC4Q6S5L8 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.74■■□□□ 1.39
SHC4Q6S5L8 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SHC4Q6S5L8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.74■■□□□ 1.39
SHC4Q6S5L8 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
SHC4Q6S5L8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SHC4Q6S5L8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
SHC4Q6S5L8 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
SHC4Q6S5L8 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.74■■□□□ 1.39
SHC4Q6S5L8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC23.74■■□□□ 1.39
SHC4Q6S5L8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
SHC4Q6S5L8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC23.73■■□□□ 1.39
SHC4Q6S5L8 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC23.73■■□□□ 1.39
SHC4Q6S5L8 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SHC4Q6S5L8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SHC4Q6S5L8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SHC4Q6S5L8 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SHC4Q6S5L8 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
SHC4Q6S5L8 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SHC4Q6S5L8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SHC4Q6S5L8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.73■■□□□ 1.39
SHC4Q6S5L8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.73■■□□□ 1.39
SHC4Q6S5L8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.73■■□□□ 1.39
SHC4Q6S5L8 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.73■■□□□ 1.39
SHC4Q6S5L8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.73■■□□□ 1.39
SHC4Q6S5L8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.73■■□□□ 1.39
SHC4Q6S5L8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SHC4Q6S5L8 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SHC4Q6S5L8 AC073130.3-201ENST00000624389 2278 ntBASIC23.73■■□□□ 1.39
SHC4Q6S5L8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SHC4Q6S5L8 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
SHC4Q6S5L8 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SHC4Q6S5L8 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SHC4Q6S5L8 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC23.72■■□□□ 1.39
SHC4Q6S5L8 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SHC4Q6S5L8 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.72■■□□□ 1.39
SHC4Q6S5L8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.72■■□□□ 1.39
SHC4Q6S5L8 EEF1DP3-203ENST00000566025 782 ntBASIC23.72■■□□□ 1.39
SHC4Q6S5L8 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC23.72■■□□□ 1.39
SHC4Q6S5L8 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
SHC4Q6S5L8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SHC4Q6S5L8 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
SHC4Q6S5L8 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SHC4Q6S5L8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.71■■□□□ 1.39
SHC4Q6S5L8 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.71■■□□□ 1.39
SHC4Q6S5L8 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.71■■□□□ 1.39
SHC4Q6S5L8 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.71■■□□□ 1.39
SHC4Q6S5L8 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SHC4Q6S5L8 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
SHC4Q6S5L8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
SHC4Q6S5L8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
SHC4Q6S5L8 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC23.7■■□□□ 1.39
SHC4Q6S5L8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SHC4Q6S5L8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
SHC4Q6S5L8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SHC4Q6S5L8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
SHC4Q6S5L8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SHC4Q6S5L8 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SHC4Q6S5L8 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SHC4Q6S5L8 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.7■■□□□ 1.38
SHC4Q6S5L8 AC142381.2-201ENST00000566120 298 ntBASIC23.7■■□□□ 1.38
SHC4Q6S5L8 AL354811.1-201ENST00000610286 706 ntBASIC23.7■■□□□ 1.38
SHC4Q6S5L8 MIR6084-201ENST00000622012 110 ntBASIC23.7■■□□□ 1.38
SHC4Q6S5L8 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms