Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.86■□□□□ 0.93
ZNF549Q6P9A3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.86■□□□□ 0.93
ZNF549Q6P9A3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF549Q6P9A3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF549Q6P9A3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF549Q6P9A3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF549Q6P9A3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
ZNF549Q6P9A3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF549Q6P9A3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF549Q6P9A3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF549Q6P9A3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF549Q6P9A3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.85■□□□□ 0.93
ZNF549Q6P9A3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.85■□□□□ 0.93
ZNF549Q6P9A3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.85■□□□□ 0.93
ZNF549Q6P9A3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.85■□□□□ 0.93
ZNF549Q6P9A3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
ZNF549Q6P9A3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF549Q6P9A3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF549Q6P9A3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF549Q6P9A3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.85■□□□□ 0.93
ZNF549Q6P9A3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF549Q6P9A3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF549Q6P9A3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF549Q6P9A3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.84■□□□□ 0.93
ZNF549Q6P9A3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF549Q6P9A3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF549Q6P9A3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF549Q6P9A3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF549Q6P9A3 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF549Q6P9A3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF549Q6P9A3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.84■□□□□ 0.93
ZNF549Q6P9A3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.84■□□□□ 0.93
ZNF549Q6P9A3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.84■□□□□ 0.93
ZNF549Q6P9A3 EEF1DP3-203ENST00000566025 782 ntBASIC20.84■□□□□ 0.93
ZNF549Q6P9A3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.84■□□□□ 0.93
ZNF549Q6P9A3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF549Q6P9A3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF549Q6P9A3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF549Q6P9A3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF549Q6P9A3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF549Q6P9A3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
ZNF549Q6P9A3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF549Q6P9A3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.83■□□□□ 0.93
ZNF549Q6P9A3 AC027612.3-201ENST00000413684 1047 ntBASIC20.83■□□□□ 0.93
ZNF549Q6P9A3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF549Q6P9A3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
ZNF549Q6P9A3 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.83■□□□□ 0.93
ZNF549Q6P9A3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF549Q6P9A3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.83■□□□□ 0.93
ZNF549Q6P9A3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF549Q6P9A3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF549Q6P9A3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
ZNF549Q6P9A3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZNF549Q6P9A3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.83■□□□□ 0.92
ZNF549Q6P9A3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.83■□□□□ 0.92
ZNF549Q6P9A3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZNF549Q6P9A3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ZNF549Q6P9A3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.82■□□□□ 0.92
ZNF549Q6P9A3 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.82■□□□□ 0.92
ZNF549Q6P9A3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.82■□□□□ 0.92
ZNF549Q6P9A3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.82■□□□□ 0.92
ZNF549Q6P9A3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
ZNF549Q6P9A3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF549Q6P9A3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF549Q6P9A3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ZNF549Q6P9A3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF549Q6P9A3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.82■□□□□ 0.92
ZNF549Q6P9A3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF549Q6P9A3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF549Q6P9A3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF549Q6P9A3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ZNF549Q6P9A3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF549Q6P9A3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.81■□□□□ 0.92
ZNF549Q6P9A3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF549Q6P9A3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF549Q6P9A3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF549Q6P9A3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF549Q6P9A3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.81■□□□□ 0.92
ZNF549Q6P9A3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF549Q6P9A3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF549Q6P9A3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF549Q6P9A3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF549Q6P9A3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.8■□□□□ 0.92
ZNF549Q6P9A3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.8■□□□□ 0.92
ZNF549Q6P9A3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.8■□□□□ 0.92
ZNF549Q6P9A3 AC053503.5-201ENST00000601508 636 ntBASIC20.8■□□□□ 0.92
ZNF549Q6P9A3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.8■□□□□ 0.92
ZNF549Q6P9A3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF549Q6P9A3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF549Q6P9A3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ZNF549Q6P9A3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
ZNF549Q6P9A3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.8■□□□□ 0.92
ZNF549Q6P9A3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF549Q6P9A3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.79■□□□□ 0.92
ZNF549Q6P9A3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF549Q6P9A3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
ZNF549Q6P9A3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF549Q6P9A3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF549Q6P9A3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.79■□□□□ 0.92
ZNF549Q6P9A3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms