Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.97■□□□□ 0.63
RTL6Q6ICC9 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.97■□□□□ 0.63
RTL6Q6ICC9 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTL6Q6ICC9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.97■□□□□ 0.63
RTL6Q6ICC9 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RTL6Q6ICC9 AC139530.1-201ENST00000575312 1977 ntBASIC18.97■□□□□ 0.63
RTL6Q6ICC9 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTL6Q6ICC9 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTL6Q6ICC9 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RTL6Q6ICC9 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTL6Q6ICC9 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTL6Q6ICC9 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.96■□□□□ 0.63
RTL6Q6ICC9 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTL6Q6ICC9 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.96■□□□□ 0.63
RTL6Q6ICC9 SLC7A5P1-201ENST00000568957 537 ntBASIC18.96■□□□□ 0.63
RTL6Q6ICC9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RTL6Q6ICC9 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTL6Q6ICC9 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTL6Q6ICC9 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTL6Q6ICC9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.96■□□□□ 0.63
RTL6Q6ICC9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTL6Q6ICC9 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTL6Q6ICC9 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTL6Q6ICC9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTL6Q6ICC9 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RTL6Q6ICC9 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTL6Q6ICC9 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RTL6Q6ICC9 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RTL6Q6ICC9 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RTL6Q6ICC9 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.95■□□□□ 0.62
RTL6Q6ICC9 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RTL6Q6ICC9 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RTL6Q6ICC9 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTL6Q6ICC9 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
RTL6Q6ICC9 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTL6Q6ICC9 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTL6Q6ICC9 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RTL6Q6ICC9 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.94■□□□□ 0.62
RTL6Q6ICC9 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RTL6Q6ICC9 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTL6Q6ICC9 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTL6Q6ICC9 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.94■□□□□ 0.62
RTL6Q6ICC9 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTL6Q6ICC9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RTL6Q6ICC9 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTL6Q6ICC9 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTL6Q6ICC9 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.94■□□□□ 0.62
RTL6Q6ICC9 AL138781.1-201ENST00000566567 1274 ntBASIC18.94■□□□□ 0.62
RTL6Q6ICC9 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTL6Q6ICC9 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.94■□□□□ 0.62
RTL6Q6ICC9 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.94■□□□□ 0.62
RTL6Q6ICC9 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTL6Q6ICC9 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTL6Q6ICC9 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTL6Q6ICC9 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTL6Q6ICC9 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTL6Q6ICC9 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.93■□□□□ 0.62
RTL6Q6ICC9 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTL6Q6ICC9 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTL6Q6ICC9 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RTL6Q6ICC9 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.93■□□□□ 0.62
RTL6Q6ICC9 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTL6Q6ICC9 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.93■□□□□ 0.62
RTL6Q6ICC9 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RTL6Q6ICC9 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTL6Q6ICC9 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
RTL6Q6ICC9 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
RTL6Q6ICC9 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.93■□□□□ 0.62
RTL6Q6ICC9 TERF1P5-201ENST00000477545 1207 ntBASIC18.93■□□□□ 0.62
RTL6Q6ICC9 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
RTL6Q6ICC9 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.93■□□□□ 0.62
RTL6Q6ICC9 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.93■□□□□ 0.62
RTL6Q6ICC9 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTL6Q6ICC9 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RTL6Q6ICC9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.93■□□□□ 0.62
RTL6Q6ICC9 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTL6Q6ICC9 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.93■□□□□ 0.62
RTL6Q6ICC9 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.93■□□□□ 0.62
RTL6Q6ICC9 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RTL6Q6ICC9 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.92■□□□□ 0.62
RTL6Q6ICC9 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.92■□□□□ 0.62
RTL6Q6ICC9 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RTL6Q6ICC9 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTL6Q6ICC9 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTL6Q6ICC9 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.92■□□□□ 0.62
RTL6Q6ICC9 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.92■□□□□ 0.62
RTL6Q6ICC9 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RTL6Q6ICC9 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RTL6Q6ICC9 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.92■□□□□ 0.62
RTL6Q6ICC9 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RTL6Q6ICC9 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.92■□□□□ 0.62
RTL6Q6ICC9 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTL6Q6ICC9 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RTL6Q6ICC9 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RTL6Q6ICC9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTL6Q6ICC9 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RTL6Q6ICC9 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTL6Q6ICC9 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RTL6Q6ICC9 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTL6Q6ICC9 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms