Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
RC3H1Q5TC82 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC26.78■■□□□ 1.88
RC3H1Q5TC82 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC26.78■■□□□ 1.88
RC3H1Q5TC82 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC26.78■■□□□ 1.88
RC3H1Q5TC82 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
RC3H1Q5TC82 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
RC3H1Q5TC82 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RC3H1Q5TC82 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
RC3H1Q5TC82 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
RC3H1Q5TC82 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RC3H1Q5TC82 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RC3H1Q5TC82 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC26.77■■□□□ 1.88
RC3H1Q5TC82 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
RC3H1Q5TC82 CDV3P1-201ENST00000471403 739 ntBASIC26.77■■□□□ 1.88
RC3H1Q5TC82 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC26.77■■□□□ 1.88
RC3H1Q5TC82 RPPH1-201ENST00000516869 333 ntBASIC26.77■■□□□ 1.88
RC3H1Q5TC82 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC26.76■■□□□ 1.87
RC3H1Q5TC82 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
RC3H1Q5TC82 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
RC3H1Q5TC82 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC26.76■■□□□ 1.87
RC3H1Q5TC82 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
RC3H1Q5TC82 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
RC3H1Q5TC82 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
RC3H1Q5TC82 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RC3H1Q5TC82 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RC3H1Q5TC82 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RC3H1Q5TC82 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RC3H1Q5TC82 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
RC3H1Q5TC82 MIR718-201ENST00000390190 70 ntBASIC26.75■■□□□ 1.87
RC3H1Q5TC82 MCRIP2P1-201ENST00000394346 511 ntBASIC26.75■■□□□ 1.87
RC3H1Q5TC82 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
RC3H1Q5TC82 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC26.75■■□□□ 1.87
RC3H1Q5TC82 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC26.75■■□□□ 1.87
RC3H1Q5TC82 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC26.75■■□□□ 1.87
RC3H1Q5TC82 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC26.75■■□□□ 1.87
RC3H1Q5TC82 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC26.75■■□□□ 1.87
RC3H1Q5TC82 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
RC3H1Q5TC82 AL589743.5-201ENST00000616611 1050 ntBASIC26.75■■□□□ 1.87
RC3H1Q5TC82 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RC3H1Q5TC82 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RC3H1Q5TC82 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC26.74■■□□□ 1.87
RC3H1Q5TC82 PNMA6B-201ENST00000538162 1200 ntBASIC26.74■■□□□ 1.87
RC3H1Q5TC82 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC26.74■■□□□ 1.87
RC3H1Q5TC82 RN7SL471P-201ENST00000580476 299 ntBASIC26.74■■□□□ 1.87
RC3H1Q5TC82 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC26.74■■□□□ 1.87
RC3H1Q5TC82 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RC3H1Q5TC82 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC26.74■■□□□ 1.87
RC3H1Q5TC82 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
RC3H1Q5TC82 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RC3H1Q5TC82 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC26.73■■□□□ 1.87
RC3H1Q5TC82 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
RC3H1Q5TC82 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
RC3H1Q5TC82 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC26.73■■□□□ 1.87
RC3H1Q5TC82 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC26.73■■□□□ 1.87
RC3H1Q5TC82 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
RC3H1Q5TC82 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
RC3H1Q5TC82 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC26.73■■□□□ 1.87
RC3H1Q5TC82 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
RC3H1Q5TC82 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.73■■□□□ 1.87
RC3H1Q5TC82 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
RC3H1Q5TC82 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC26.73■■□□□ 1.87
RC3H1Q5TC82 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RC3H1Q5TC82 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RC3H1Q5TC82 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC26.72■■□□□ 1.87
RC3H1Q5TC82 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RC3H1Q5TC82 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RC3H1Q5TC82 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RC3H1Q5TC82 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RC3H1Q5TC82 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RC3H1Q5TC82 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC26.72■■□□□ 1.87
RC3H1Q5TC82 MIR4497-201ENST00000583208 89 ntBASIC26.72■■□□□ 1.87
RC3H1Q5TC82 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.72■■□□□ 1.87
RC3H1Q5TC82 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC26.72■■□□□ 1.87
RC3H1Q5TC82 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RC3H1Q5TC82 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
RC3H1Q5TC82 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RC3H1Q5TC82 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
RC3H1Q5TC82 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC26.71■■□□□ 1.87
RC3H1Q5TC82 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
RC3H1Q5TC82 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
RC3H1Q5TC82 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC26.71■■□□□ 1.87
RC3H1Q5TC82 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC26.71■■□□□ 1.87
RC3H1Q5TC82 KRT17P3-201ENST00000420566 1262 ntBASIC26.71■■□□□ 1.87
RC3H1Q5TC82 AC245052.3-201ENST00000450182 901 ntBASIC26.71■■□□□ 1.87
RC3H1Q5TC82 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC26.71■■□□□ 1.87
RC3H1Q5TC82 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RC3H1Q5TC82 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
RC3H1Q5TC82 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
RC3H1Q5TC82 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RC3H1Q5TC82 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
RC3H1Q5TC82 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
RC3H1Q5TC82 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
RC3H1Q5TC82 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
RC3H1Q5TC82 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC26.7■■□□□ 1.86
RC3H1Q5TC82 SAPCD2P1-201ENST00000395413 1184 ntBASIC26.7■■□□□ 1.86
RC3H1Q5TC82 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
RC3H1Q5TC82 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC26.7■■□□□ 1.86
RC3H1Q5TC82 VMO1-204ENST00000441199 741 ntTSL 2 BASIC26.7■■□□□ 1.86
RC3H1Q5TC82 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC26.7■■□□□ 1.86
RC3H1Q5TC82 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms