Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC14.35□□□□□ -0.11
LINC00242Q5T6M2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00242Q5T6M2 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00242Q5T6M2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00242Q5T6M2 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LINC00242Q5T6M2 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC14.35□□□□□ -0.11
LINC00242Q5T6M2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00242Q5T6M2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC14.35□□□□□ -0.11
LINC00242Q5T6M2 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LINC00242Q5T6M2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC14.35□□□□□ -0.11
LINC00242Q5T6M2 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00242Q5T6M2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LINC00242Q5T6M2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00242Q5T6M2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00242Q5T6M2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC14.35□□□□□ -0.11
LINC00242Q5T6M2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00242Q5T6M2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LINC00242Q5T6M2 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00242Q5T6M2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
LINC00242Q5T6M2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00242Q5T6M2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00242Q5T6M2 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00242Q5T6M2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00242Q5T6M2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC00242Q5T6M2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
LINC00242Q5T6M2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
LINC00242Q5T6M2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00242Q5T6M2 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00242Q5T6M2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC00242Q5T6M2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00242Q5T6M2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC00242Q5T6M2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00242Q5T6M2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC00242Q5T6M2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00242Q5T6M2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00242Q5T6M2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LINC00242Q5T6M2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC00242Q5T6M2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC14.34□□□□□ -0.11
LINC00242Q5T6M2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC00242Q5T6M2 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC00242Q5T6M2 AC010525.1-201ENST00000585559 441 ntBASIC14.34□□□□□ -0.11
LINC00242Q5T6M2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC00242Q5T6M2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
LINC00242Q5T6M2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC00242Q5T6M2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00242Q5T6M2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
LINC00242Q5T6M2 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
LINC00242Q5T6M2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00242Q5T6M2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC00242Q5T6M2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC00242Q5T6M2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00242Q5T6M2 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC00242Q5T6M2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC00242Q5T6M2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC14.34□□□□□ -0.11
LINC00242Q5T6M2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC00242Q5T6M2 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00242Q5T6M2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00242Q5T6M2 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
LINC00242Q5T6M2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LINC00242Q5T6M2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC14.33□□□□□ -0.11
LINC00242Q5T6M2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
LINC00242Q5T6M2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LINC00242Q5T6M2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
LINC00242Q5T6M2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
LINC00242Q5T6M2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
LINC00242Q5T6M2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC14.33□□□□□ -0.12
LINC00242Q5T6M2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00242Q5T6M2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00242Q5T6M2 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC14.33□□□□□ -0.12
LINC00242Q5T6M2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC14.33□□□□□ -0.12
LINC00242Q5T6M2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00242Q5T6M2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00242Q5T6M2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00242Q5T6M2 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00242Q5T6M2 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
LINC00242Q5T6M2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00242Q5T6M2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00242Q5T6M2 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC14.33□□□□□ -0.12
LINC00242Q5T6M2 UNC93B8-201ENST00000511903 705 ntBASIC14.33□□□□□ -0.12
LINC00242Q5T6M2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00242Q5T6M2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00242Q5T6M2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
LINC00242Q5T6M2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00242Q5T6M2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00242Q5T6M2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00242Q5T6M2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00242Q5T6M2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC14.33□□□□□ -0.12
LINC00242Q5T6M2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00242Q5T6M2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC14.33□□□□□ -0.12
LINC00242Q5T6M2 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00242Q5T6M2 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00242Q5T6M2 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
LINC00242Q5T6M2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00242Q5T6M2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00242Q5T6M2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00242Q5T6M2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
LINC00242Q5T6M2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00242Q5T6M2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00242Q5T6M2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
LINC00242Q5T6M2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms