Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RGMA-211ENST00000557420 989 ntTSL 3 BASIC22.35■■□□□ 1.17
VARS2Q5ST30 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
VARS2Q5ST30 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
VARS2Q5ST30 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.35■■□□□ 1.17
VARS2Q5ST30 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
VARS2Q5ST30 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
VARS2Q5ST30 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.35■■□□□ 1.17
VARS2Q5ST30 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
VARS2Q5ST30 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.35■■□□□ 1.17
VARS2Q5ST30 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
VARS2Q5ST30 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
VARS2Q5ST30 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.35■■□□□ 1.17
VARS2Q5ST30 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.34■■□□□ 1.17
VARS2Q5ST30 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.34■■□□□ 1.17
VARS2Q5ST30 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
VARS2Q5ST30 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
VARS2Q5ST30 AC073210.2-201ENST00000430369 194 ntBASIC22.34■■□□□ 1.17
VARS2Q5ST30 KRT18P6-201ENST00000555540 1265 ntBASIC22.34■■□□□ 1.17
VARS2Q5ST30 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC22.34■■□□□ 1.17
VARS2Q5ST30 AL591742.1-201ENST00000604433 565 ntBASIC22.34■■□□□ 1.17
VARS2Q5ST30 AC133041.1-202ENST00000642053 222 ntBASIC22.34■■□□□ 1.17
VARS2Q5ST30 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
VARS2Q5ST30 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.34■■□□□ 1.17
VARS2Q5ST30 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.33■■□□□ 1.17
VARS2Q5ST30 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.33■■□□□ 1.17
VARS2Q5ST30 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
VARS2Q5ST30 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
VARS2Q5ST30 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
VARS2Q5ST30 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC22.33■■□□□ 1.17
VARS2Q5ST30 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
VARS2Q5ST30 MIPEPP3-201ENST00000412105 444 ntBASIC22.33■■□□□ 1.17
VARS2Q5ST30 AL512625.2-201ENST00000417533 625 ntBASIC22.33■■□□□ 1.17
VARS2Q5ST30 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
VARS2Q5ST30 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC22.33■■□□□ 1.17
VARS2Q5ST30 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.33■■□□□ 1.17
VARS2Q5ST30 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.33■■□□□ 1.17
VARS2Q5ST30 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC22.33■■□□□ 1.17
VARS2Q5ST30 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC22.33■■□□□ 1.17
VARS2Q5ST30 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
VARS2Q5ST30 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
VARS2Q5ST30 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.32■■□□□ 1.16
VARS2Q5ST30 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
VARS2Q5ST30 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
VARS2Q5ST30 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.32■■□□□ 1.16
VARS2Q5ST30 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
VARS2Q5ST30 C11orf96-202ENST00000528572 1834 ntBASIC22.32■■□□□ 1.16
VARS2Q5ST30 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
VARS2Q5ST30 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
VARS2Q5ST30 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
VARS2Q5ST30 AL162412.1-201ENST00000567129 965 ntBASIC22.32■■□□□ 1.16
VARS2Q5ST30 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC22.32■■□□□ 1.16
VARS2Q5ST30 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.32■■□□□ 1.16
VARS2Q5ST30 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC22.32■■□□□ 1.16
VARS2Q5ST30 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
VARS2Q5ST30 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
VARS2Q5ST30 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
VARS2Q5ST30 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.32■■□□□ 1.16
VARS2Q5ST30 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
VARS2Q5ST30 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VARS2Q5ST30 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VARS2Q5ST30 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VARS2Q5ST30 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VARS2Q5ST30 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VARS2Q5ST30 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VARS2Q5ST30 AC242852.2-201ENST00000615738 1807 ntBASIC22.31■■□□□ 1.16
VARS2Q5ST30 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.31■■□□□ 1.16
VARS2Q5ST30 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VARS2Q5ST30 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
VARS2Q5ST30 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.31■■□□□ 1.16
VARS2Q5ST30 AC068473.5-201ENST00000616428 2072 ntBASIC22.31■■□□□ 1.16
VARS2Q5ST30 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
VARS2Q5ST30 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VARS2Q5ST30 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
VARS2Q5ST30 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.31■■□□□ 1.16
VARS2Q5ST30 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
VARS2Q5ST30 MIR4758-201ENST00000577688 71 ntBASIC22.31■■□□□ 1.16
VARS2Q5ST30 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
VARS2Q5ST30 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VARS2Q5ST30 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VARS2Q5ST30 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
VARS2Q5ST30 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
VARS2Q5ST30 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
VARS2Q5ST30 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
VARS2Q5ST30 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.3■■□□□ 1.16
VARS2Q5ST30 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.3■■□□□ 1.16
VARS2Q5ST30 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
VARS2Q5ST30 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC22.3■■□□□ 1.16
VARS2Q5ST30 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC22.3■■□□□ 1.16
VARS2Q5ST30 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.3■■□□□ 1.16
VARS2Q5ST30 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC22.3■■□□□ 1.16
VARS2Q5ST30 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
VARS2Q5ST30 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
VARS2Q5ST30 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
VARS2Q5ST30 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
VARS2Q5ST30 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
VARS2Q5ST30 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
VARS2Q5ST30 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.29■■□□□ 1.16
VARS2Q5ST30 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
VARS2Q5ST30 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
VARS2Q5ST30 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms