Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.3■□□□□ 0.52
CHRFAM7AQ494W8 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRFAM7AQ494W8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRFAM7AQ494W8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHRFAM7AQ494W8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRFAM7AQ494W8 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRFAM7AQ494W8 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.3■□□□□ 0.52
CHRFAM7AQ494W8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.29■□□□□ 0.52
CHRFAM7AQ494W8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.29■□□□□ 0.52
CHRFAM7AQ494W8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHRFAM7AQ494W8 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHRFAM7AQ494W8 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
CHRFAM7AQ494W8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CHRFAM7AQ494W8 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.29■□□□□ 0.52
CHRFAM7AQ494W8 DUX4L4-201ENST00000566884 1269 ntBASIC18.29■□□□□ 0.52
CHRFAM7AQ494W8 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.29■□□□□ 0.52
CHRFAM7AQ494W8 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.29■□□□□ 0.52
CHRFAM7AQ494W8 AC005229.4-201ENST00000610085 2198 ntBASIC18.29■□□□□ 0.52
CHRFAM7AQ494W8 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.29■□□□□ 0.52
CHRFAM7AQ494W8 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHRFAM7AQ494W8 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHRFAM7AQ494W8 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHRFAM7AQ494W8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHRFAM7AQ494W8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CHRFAM7AQ494W8 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHRFAM7AQ494W8 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHRFAM7AQ494W8 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.28■□□□□ 0.52
CHRFAM7AQ494W8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.28■□□□□ 0.52
CHRFAM7AQ494W8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CHRFAM7AQ494W8 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.28■□□□□ 0.52
CHRFAM7AQ494W8 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHRFAM7AQ494W8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHRFAM7AQ494W8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHRFAM7AQ494W8 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CHRFAM7AQ494W8 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.28■□□□□ 0.52
CHRFAM7AQ494W8 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.28■□□□□ 0.52
CHRFAM7AQ494W8 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CHRFAM7AQ494W8 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHRFAM7AQ494W8 AC137761.2-201ENST00000561729 223 ntBASIC18.28■□□□□ 0.52
CHRFAM7AQ494W8 AC145350.3-201ENST00000569033 163 ntBASIC18.28■□□□□ 0.52
CHRFAM7AQ494W8 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHRFAM7AQ494W8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.28■□□□□ 0.52
CHRFAM7AQ494W8 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHRFAM7AQ494W8 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.28■□□□□ 0.52
CHRFAM7AQ494W8 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHRFAM7AQ494W8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHRFAM7AQ494W8 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.27■□□□□ 0.52
CHRFAM7AQ494W8 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CHRFAM7AQ494W8 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHRFAM7AQ494W8 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.27■□□□□ 0.52
CHRFAM7AQ494W8 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.27■□□□□ 0.52
CHRFAM7AQ494W8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHRFAM7AQ494W8 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHRFAM7AQ494W8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.27■□□□□ 0.52
CHRFAM7AQ494W8 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHRFAM7AQ494W8 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CHRFAM7AQ494W8 ABHD17AP1-201ENST00000358206 933 ntBASIC18.27■□□□□ 0.52
CHRFAM7AQ494W8 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.27■□□□□ 0.52
CHRFAM7AQ494W8 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHRFAM7AQ494W8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHRFAM7AQ494W8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.27■□□□□ 0.52
CHRFAM7AQ494W8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.27■□□□□ 0.52
CHRFAM7AQ494W8 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHRFAM7AQ494W8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHRFAM7AQ494W8 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.27■□□□□ 0.51
CHRFAM7AQ494W8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHRFAM7AQ494W8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHRFAM7AQ494W8 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHRFAM7AQ494W8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CHRFAM7AQ494W8 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.27■□□□□ 0.51
CHRFAM7AQ494W8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.27■□□□□ 0.51
CHRFAM7AQ494W8 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHRFAM7AQ494W8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.26■□□□□ 0.51
CHRFAM7AQ494W8 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHRFAM7AQ494W8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.26■□□□□ 0.51
CHRFAM7AQ494W8 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHRFAM7AQ494W8 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.26■□□□□ 0.51
CHRFAM7AQ494W8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
CHRFAM7AQ494W8 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.26■□□□□ 0.51
CHRFAM7AQ494W8 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHRFAM7AQ494W8 AC004687.1-201ENST00000579003 1625 ntBASIC18.26■□□□□ 0.51
CHRFAM7AQ494W8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHRFAM7AQ494W8 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CHRFAM7AQ494W8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CHRFAM7AQ494W8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.25■□□□□ 0.51
CHRFAM7AQ494W8 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.25■□□□□ 0.51
CHRFAM7AQ494W8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.25■□□□□ 0.51
CHRFAM7AQ494W8 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CHRFAM7AQ494W8 AC006015.1-201ENST00000429970 570 ntBASIC18.25■□□□□ 0.51
CHRFAM7AQ494W8 AC026185.1-201ENST00000445748 174 ntBASIC18.25■□□□□ 0.51
CHRFAM7AQ494W8 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.25■□□□□ 0.51
CHRFAM7AQ494W8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHRFAM7AQ494W8 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHRFAM7AQ494W8 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHRFAM7AQ494W8 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHRFAM7AQ494W8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
CHRFAM7AQ494W8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHRFAM7AQ494W8 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.25■□□□□ 0.51
CHRFAM7AQ494W8 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRFAM7AQ494W8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms