Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC008694.1-202ENST00000636953 945 ntBASIC25.38■■□□□ 1.65
PDS5AQ29RF7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PDS5AQ29RF7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PDS5AQ29RF7 C11orf96-202ENST00000528572 1834 ntBASIC25.38■■□□□ 1.65
PDS5AQ29RF7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PDS5AQ29RF7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC25.38■■□□□ 1.65
PDS5AQ29RF7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC25.38■■□□□ 1.65
PDS5AQ29RF7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PDS5AQ29RF7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
PDS5AQ29RF7 AC091799.1-201ENST00000422823 811 ntBASIC25.37■■□□□ 1.65
PDS5AQ29RF7 AC245052.3-201ENST00000450182 901 ntBASIC25.37■■□□□ 1.65
PDS5AQ29RF7 AC093787.1-201ENST00000450396 207 ntBASIC25.37■■□□□ 1.65
PDS5AQ29RF7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC25.37■■□□□ 1.65
PDS5AQ29RF7 RARRES2P4-201ENST00000514074 484 ntBASIC25.37■■□□□ 1.65
PDS5AQ29RF7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC25.37■■□□□ 1.65
PDS5AQ29RF7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC25.37■■□□□ 1.65
PDS5AQ29RF7 AC016405.3-201ENST00000607710 860 ntBASIC25.37■■□□□ 1.65
PDS5AQ29RF7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PDS5AQ29RF7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PDS5AQ29RF7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PDS5AQ29RF7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PDS5AQ29RF7 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.37■■□□□ 1.65
PDS5AQ29RF7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
PDS5AQ29RF7 GOLGA2P6-201ENST00000340929 2049 ntBASIC25.37■■□□□ 1.65
PDS5AQ29RF7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
PDS5AQ29RF7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PDS5AQ29RF7 MKRN4P-201ENST00000444706 1521 ntBASIC25.37■■□□□ 1.65
PDS5AQ29RF7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC25.37■■□□□ 1.65
PDS5AQ29RF7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC25.37■■□□□ 1.65
PDS5AQ29RF7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC25.37■■□□□ 1.65
PDS5AQ29RF7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PDS5AQ29RF7 AC133561.1-201ENST00000568600 2415 ntBASIC25.36■■□□□ 1.65
PDS5AQ29RF7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PDS5AQ29RF7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PDS5AQ29RF7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PDS5AQ29RF7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
PDS5AQ29RF7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC25.36■■□□□ 1.65
PDS5AQ29RF7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PDS5AQ29RF7 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PDS5AQ29RF7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PDS5AQ29RF7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PDS5AQ29RF7 APTR-205ENST00000447009 902 ntTSL 2 BASIC25.36■■□□□ 1.65
PDS5AQ29RF7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC25.36■■□□□ 1.65
PDS5AQ29RF7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC25.36■■□□□ 1.65
PDS5AQ29RF7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC25.36■■□□□ 1.65
PDS5AQ29RF7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC25.36■■□□□ 1.65
PDS5AQ29RF7 AC133041.1-202ENST00000642053 222 ntBASIC25.36■■□□□ 1.65
PDS5AQ29RF7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
PDS5AQ29RF7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
PDS5AQ29RF7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC25.35■■□□□ 1.65
PDS5AQ29RF7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC25.35■■□□□ 1.65
PDS5AQ29RF7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
PDS5AQ29RF7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC25.35■■□□□ 1.65
PDS5AQ29RF7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC25.35■■□□□ 1.65
PDS5AQ29RF7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
PDS5AQ29RF7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PDS5AQ29RF7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC25.35■■□□□ 1.65
PDS5AQ29RF7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC25.35■■□□□ 1.65
PDS5AQ29RF7 AC092118.2-201ENST00000613495 667 ntBASIC25.35■■□□□ 1.65
PDS5AQ29RF7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC25.35■■□□□ 1.65
PDS5AQ29RF7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
PDS5AQ29RF7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC25.34■■□□□ 1.65
PDS5AQ29RF7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PDS5AQ29RF7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
PDS5AQ29RF7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC25.34■■□□□ 1.65
PDS5AQ29RF7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PDS5AQ29RF7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC25.34■■□□□ 1.65
PDS5AQ29RF7 MIPEPP3-201ENST00000412105 444 ntBASIC25.34■■□□□ 1.65
PDS5AQ29RF7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PDS5AQ29RF7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC25.34■■□□□ 1.65
PDS5AQ29RF7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC25.34■■□□□ 1.65
PDS5AQ29RF7 FAM21FP-204ENST00000608637 956 ntBASIC25.34■■□□□ 1.65
PDS5AQ29RF7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
PDS5AQ29RF7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PDS5AQ29RF7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PDS5AQ29RF7 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PDS5AQ29RF7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PDS5AQ29RF7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PDS5AQ29RF7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
PDS5AQ29RF7 AC012676.1-201ENST00000574705 1949 ntBASIC25.33■■□□□ 1.65
PDS5AQ29RF7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC25.33■■□□□ 1.64
PDS5AQ29RF7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC25.33■■□□□ 1.64
PDS5AQ29RF7 AC098934.4-201ENST00000564127 592 ntBASIC25.33■■□□□ 1.64
PDS5AQ29RF7 MIR4758-201ENST00000577688 71 ntBASIC25.33■■□□□ 1.64
PDS5AQ29RF7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC25.33■■□□□ 1.64
PDS5AQ29RF7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC25.33■■□□□ 1.64
PDS5AQ29RF7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
PDS5AQ29RF7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
PDS5AQ29RF7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
PDS5AQ29RF7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PDS5AQ29RF7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
PDS5AQ29RF7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PDS5AQ29RF7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PDS5AQ29RF7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC25.32■■□□□ 1.64
PDS5AQ29RF7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PDS5AQ29RF7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC25.32■■□□□ 1.64
PDS5AQ29RF7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
PDS5AQ29RF7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PDS5AQ29RF7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
PDS5AQ29RF7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC25.31■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms