Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.85■□□□□ 0.93
SF3A2Q15428 SNORA78-201ENST00000459373 127 ntBASIC20.85■□□□□ 0.93
SF3A2Q15428 RPPH1-201ENST00000516869 333 ntBASIC20.85■□□□□ 0.93
SF3A2Q15428 C1QBPP2-201ENST00000528754 825 ntBASIC20.85■□□□□ 0.93
SF3A2Q15428 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.85■□□□□ 0.93
SF3A2Q15428 Z99916.2-201ENST00000604037 246 ntBASIC20.85■□□□□ 0.93
SF3A2Q15428 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.85■□□□□ 0.93
SF3A2Q15428 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SF3A2Q15428 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SF3A2Q15428 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.85■□□□□ 0.93
SF3A2Q15428 LINC01124-201ENST00000409786 2117 ntBASIC20.84■□□□□ 0.93
SF3A2Q15428 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.84■□□□□ 0.93
SF3A2Q15428 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SF3A2Q15428 AC004812.2-201ENST00000611079 2094 ntBASIC20.84■□□□□ 0.93
SF3A2Q15428 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SF3A2Q15428 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SF3A2Q15428 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SF3A2Q15428 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SF3A2Q15428 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.84■□□□□ 0.93
SF3A2Q15428 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SF3A2Q15428 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.84■□□□□ 0.93
SF3A2Q15428 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.84■□□□□ 0.93
SF3A2Q15428 KRT18P21-201ENST00000515767 1272 ntBASIC20.84■□□□□ 0.93
SF3A2Q15428 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.84■□□□□ 0.93
SF3A2Q15428 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SF3A2Q15428 AL162412.1-201ENST00000567129 965 ntBASIC20.84■□□□□ 0.93
SF3A2Q15428 AC008175.2-201ENST00000612840 297 ntBASIC20.84■□□□□ 0.93
SF3A2Q15428 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SF3A2Q15428 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SF3A2Q15428 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SF3A2Q15428 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SF3A2Q15428 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SF3A2Q15428 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.84■□□□□ 0.93
SF3A2Q15428 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SF3A2Q15428 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.83■□□□□ 0.93
SF3A2Q15428 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SF3A2Q15428 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.83■□□□□ 0.93
SF3A2Q15428 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
SF3A2Q15428 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.83■□□□□ 0.93
SF3A2Q15428 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.83■□□□□ 0.93
SF3A2Q15428 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.83■□□□□ 0.93
SF3A2Q15428 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
SF3A2Q15428 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SF3A2Q15428 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SF3A2Q15428 RBM17P2-201ENST00000616397 1405 ntBASIC20.83■□□□□ 0.93
SF3A2Q15428 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SF3A2Q15428 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.83■□□□□ 0.92
SF3A2Q15428 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
SF3A2Q15428 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
SF3A2Q15428 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SF3A2Q15428 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
SF3A2Q15428 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SF3A2Q15428 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.82■□□□□ 0.92
SF3A2Q15428 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SF3A2Q15428 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SF3A2Q15428 OR7E47P-201ENST00000546390 1422 ntBASIC20.82■□□□□ 0.92
SF3A2Q15428 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SF3A2Q15428 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
SF3A2Q15428 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.82■□□□□ 0.92
SF3A2Q15428 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
SF3A2Q15428 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SF3A2Q15428 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SF3A2Q15428 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SF3A2Q15428 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SF3A2Q15428 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SF3A2Q15428 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SF3A2Q15428 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SF3A2Q15428 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
SF3A2Q15428 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SF3A2Q15428 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
SF3A2Q15428 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SF3A2Q15428 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SF3A2Q15428 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SF3A2Q15428 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SF3A2Q15428 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SF3A2Q15428 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.81■□□□□ 0.92
SF3A2Q15428 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
SF3A2Q15428 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SF3A2Q15428 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SF3A2Q15428 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.81■□□□□ 0.92
SF3A2Q15428 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SF3A2Q15428 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.81■□□□□ 0.92
SF3A2Q15428 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.81■□□□□ 0.92
SF3A2Q15428 AP006587.3-201ENST00000525742 1516 ntBASIC20.81■□□□□ 0.92
SF3A2Q15428 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SF3A2Q15428 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SF3A2Q15428 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SF3A2Q15428 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SF3A2Q15428 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SF3A2Q15428 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
SF3A2Q15428 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SF3A2Q15428 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SF3A2Q15428 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SF3A2Q15428 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SF3A2Q15428 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SF3A2Q15428 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.8■□□□□ 0.92
SF3A2Q15428 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.8■□□□□ 0.92
SF3A2Q15428 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.8■□□□□ 0.92
SF3A2Q15428 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.8■□□□□ 0.92
SF3A2Q15428 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms