Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD47Q08722 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.46■□□□□ 0.71
CD47Q08722 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.46■□□□□ 0.71
CD47Q08722 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CD47Q08722 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD47Q08722 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD47Q08722 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CD47Q08722 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.46■□□□□ 0.71
CD47Q08722 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.46■□□□□ 0.71
CD47Q08722 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CD47Q08722 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD47Q08722 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD47Q08722 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CD47Q08722 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD47Q08722 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.46■□□□□ 0.71
CD47Q08722 MIR3181-201ENST00000578512 73 ntBASIC19.46■□□□□ 0.71
CD47Q08722 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.46■□□□□ 0.71
CD47Q08722 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.46■□□□□ 0.71
CD47Q08722 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.46■□□□□ 0.71
CD47Q08722 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CD47Q08722 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.46■□□□□ 0.71
CD47Q08722 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CD47Q08722 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CD47Q08722 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.46■□□□□ 0.71
CD47Q08722 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
CD47Q08722 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CD47Q08722 AFG3L1P-217ENST00000557444 2447 ntBASIC19.45■□□□□ 0.7
CD47Q08722 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.45■□□□□ 0.7
CD47Q08722 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD47Q08722 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CD47Q08722 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.45■□□□□ 0.7
CD47Q08722 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.45■□□□□ 0.7
CD47Q08722 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD47Q08722 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD47Q08722 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD47Q08722 AC131281.2-201ENST00000520478 145 ntBASIC19.45■□□□□ 0.7
CD47Q08722 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CD47Q08722 MIR4466-201ENST00000606121 54 ntBASIC19.45■□□□□ 0.7
CD47Q08722 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CD47Q08722 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD47Q08722 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CD47Q08722 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD47Q08722 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.45■□□□□ 0.7
CD47Q08722 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD47Q08722 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CD47Q08722 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CD47Q08722 AC073314.1-201ENST00000568729 2216 ntBASIC19.44■□□□□ 0.7
CD47Q08722 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD47Q08722 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CD47Q08722 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD47Q08722 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD47Q08722 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD47Q08722 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD47Q08722 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
CD47Q08722 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD47Q08722 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CD47Q08722 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.44■□□□□ 0.7
CD47Q08722 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.44■□□□□ 0.7
CD47Q08722 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.44■□□□□ 0.7
CD47Q08722 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CD47Q08722 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CD47Q08722 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD47Q08722 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CD47Q08722 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD47Q08722 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CD47Q08722 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD47Q08722 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CD47Q08722 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CD47Q08722 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD47Q08722 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CD47Q08722 PCDHAC2-203ENST00000615316 3011 ntBASIC19.43■□□□□ 0.7
CD47Q08722 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.43■□□□□ 0.7
CD47Q08722 AC131212.1-201ENST00000613771 668 ntBASIC19.43■□□□□ 0.7
CD47Q08722 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD47Q08722 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.43■□□□□ 0.7
CD47Q08722 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD47Q08722 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.43■□□□□ 0.7
CD47Q08722 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD47Q08722 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.43■□□□□ 0.7
CD47Q08722 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CD47Q08722 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD47Q08722 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
CD47Q08722 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD47Q08722 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD47Q08722 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.42■□□□□ 0.7
CD47Q08722 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD47Q08722 SYT6-210ENST00000641643 1587 ntBASIC19.42■□□□□ 0.7
CD47Q08722 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CD47Q08722 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.42■□□□□ 0.7
CD47Q08722 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD47Q08722 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD47Q08722 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD47Q08722 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD47Q08722 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
CD47Q08722 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD47Q08722 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.42■□□□□ 0.7
CD47Q08722 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD47Q08722 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD47Q08722 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD47Q08722 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms