Protein–RNA interactions for Protein: Q08003

RFU1, Regulator of free ubiquitin chains 1, yeastyeast

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFU1Q08003 PBP2YBR233W 1242 nt2.13□□□□□ -2.07
RFU1Q08003 AMS1YGL156W 3252 nt2.12□□□□□ -2.07
RFU1Q08003 ANR2YKL047W 1551 nt2.12□□□□□ -2.07
RFU1Q08003 TIM9YEL020W-A 264 nt2.12□□□□□ -2.07
RFU1Q08003 EMC6YLL014W 327 nt2.12□□□□□ -2.07
RFU1Q08003 SPC3YLR066W 555 nt2.12□□□□□ -2.07
RFU1Q08003 MST28YAR033W 705 nt2.12□□□□□ -2.07
RFU1Q08003 SUB1YMR039C 879 nt2.12□□□□□ -2.07
RFU1Q08003 YNL144W-AYNL144W-A 84 nt2.12□□□□□ -2.07
RFU1Q08003 YBL077WYBL077W 432 nt2.12□□□□□ -2.07
RFU1Q08003 YOR055WYOR055W 435 nt2.12□□□□□ -2.07
RFU1Q08003 VPS13YLL040C 9435 nt2.12□□□□□ -2.07
RFU1Q08003 SCY1YGL083W 2415 nt2.12□□□□□ -2.07
RFU1Q08003 ENP2YGR145W 2124 nt2.12□□□□□ -2.07
RFU1Q08003 CLG1YGL215W 1359 nt2.11□□□□□ -2.07
RFU1Q08003 KSP1YHR082C 3090 nt2.11□□□□□ -2.07
RFU1Q08003 NHP10YDL002C 612 nt2.11□□□□□ -2.07
RFU1Q08003 YOS1YER074W-A 258 nt2.11□□□□□ -2.07
RFU1Q08003 ERV1YGR029W 570 nt2.11□□□□□ -2.07
RFU1Q08003 CAB2YIL083C 1098 nt2.11□□□□□ -2.07
RFU1Q08003 SPB1YCL054W 2526 nt2.11□□□□□ -2.07
RFU1Q08003 SLN1YIL147C 3663 nt2.1□□□□□ -2.07
RFU1Q08003 AFI1YOR129C 2682 nt2.1□□□□□ -2.07
RFU1Q08003 SNX41YDR425W 1878 nt2.1□□□□□ -2.07
RFU1Q08003 RPB9YGL070C 369 nt2.1□□□□□ -2.07
RFU1Q08003 YJR020WYJR020W 333 nt2.1□□□□□ -2.07
RFU1Q08003 YNL067W-AYNL067W-A 147 nt2.1□□□□□ -2.07
RFU1Q08003 MBA1YBR185C 837 nt2.1□□□□□ -2.07
RFU1Q08003 RGA1YOR127W 3024 nt2.1□□□□□ -2.07
RFU1Q08003 BUB1YGR188C 3066 nt2.09□□□□□ -2.07
RFU1Q08003 ROY1YMR258C 1662 nt2.09□□□□□ -2.07
RFU1Q08003 YRR1YOR162C 2433 nt2.09□□□□□ -2.07
RFU1Q08003 CSF1YLR087C 8877 nt2.09□□□□□ -2.07
RFU1Q08003 YDL050CYDL050C 372 nt2.09□□□□□ -2.07
RFU1Q08003 HTA1YDR225W 399 nt2.09□□□□□ -2.07
RFU1Q08003 SED5YLR026C 1023 nt2.09□□□□□ -2.07
RFU1Q08003 ATG34YOL083W 1239 nt2.09□□□□□ -2.07
RFU1Q08003 PBI1YPL272C 1554 nt2.09□□□□□ -2.08
RFU1Q08003 PHO91YNR013C 2685 nt2.09□□□□□ -2.08
RFU1Q08003 NUP170YBL079W 4509 nt2.09□□□□□ -2.08
RFU1Q08003 SCD5YOR329C 2619 nt2.08□□□□□ -2.08
RFU1Q08003 SEC16YPL085W 6588 nt2.08□□□□□ -2.08
RFU1Q08003 SMC6YLR383W 3345 nt2.08□□□□□ -2.08
RFU1Q08003 HMO1YDR174W 741 nt2.08□□□□□ -2.08
RFU1Q08003 RPL27BYDR471W 411 nt2.08□□□□□ -2.08
RFU1Q08003 PEX4YGR133W 552 nt2.08□□□□□ -2.08
RFU1Q08003 SAW1YAL027W 786 nt2.08□□□□□ -2.08
RFU1Q08003 YLR154W-EYLR154W-E 204 nt2.08□□□□□ -2.08
RFU1Q08003 CWC24YLR323C 780 nt2.08□□□□□ -2.08
RFU1Q08003 MED11YMR112C 396 nt2.08□□□□□ -2.08
RFU1Q08003 UAF30YOR295W 687 nt2.08□□□□□ -2.08
RFU1Q08003 VMA9YCL005W-A 222 nt2.08□□□□□ -2.08
RFU1Q08003 BOI1YBL085W 2943 nt2.08□□□□□ -2.08
RFU1Q08003 UBX3YDL091C 1368 nt2.08□□□□□ -2.08
RFU1Q08003 SVL3YPL032C 2478 nt2.08□□□□□ -2.08
RFU1Q08003 MUS81YDR386W 1899 nt2.07□□□□□ -2.08
RFU1Q08003 MSA1YOR066W 1890 nt2.07□□□□□ -2.08
RFU1Q08003 YPR097WYPR097W 3222 nt2.07□□□□□ -2.08
RFU1Q08003 ATP22YDR350C 2055 nt2.07□□□□□ -2.08
RFU1Q08003 MRPL9YGR220C 810 nt2.07□□□□□ -2.08
RFU1Q08003 YIL156W-BYIL156W-B 222 nt2.07□□□□□ -2.08
RFU1Q08003 BET3YKR068C 582 nt2.07□□□□□ -2.08
RFU1Q08003 YOR263CYOR263C 408 nt2.07□□□□□ -2.08
RFU1Q08003 snR43snR43 209 nt2.07□□□□□ -2.08
RFU1Q08003 SIP3YNL257C 3690 nt2.07□□□□□ -2.08
RFU1Q08003 YMR1YJR110W 2067 nt2.06□□□□□ -2.08
RFU1Q08003 IRA2YOL081W 9240 nt2.06□□□□□ -2.08
RFU1Q08003 YOL098CYOL098C 3114 nt2.06□□□□□ -2.08
RFU1Q08003 YCR064CYCR064C 411 nt2.06□□□□□ -2.08
RFU1Q08003 PRE1YER012W 597 nt2.06□□□□□ -2.08
RFU1Q08003 EMC2YJR088C 879 nt2.06□□□□□ -2.08
RFU1Q08003 SAS2YMR127C 1017 nt2.06□□□□□ -2.08
RFU1Q08003 HMT1YBR034C 1047 nt2.06□□□□□ -2.08
RFU1Q08003 CWH41YGL027C 2502 nt2.06□□□□□ -2.08
RFU1Q08003 PCL9YDL179W 915 nt2.05□□□□□ -2.08
RFU1Q08003 YGR073CYGR073C 372 nt2.05□□□□□ -2.08
RFU1Q08003 YBR209WYBR209W 318 nt2.05□□□□□ -2.08
RFU1Q08003 KAR4YCL055W 1008 nt2.05□□□□□ -2.08
RFU1Q08003 YLR446WYLR446W 1302 nt2.05□□□□□ -2.08
RFU1Q08003 STH1YIL126W 4080 nt2.05□□□□□ -2.08
RFU1Q08003 BNI1YNL271C 5862 nt2.05□□□□□ -2.08
RFU1Q08003 RPN4YDL020C 1596 nt2.05□□□□□ -2.08
RFU1Q08003 YIL080WYIL080W 4722 nt2.05□□□□□ -2.08
RFU1Q08003 HAP4YKL109W 1665 nt2.05□□□□□ -2.08
RFU1Q08003 MSB1YOR188W 3414 nt2.05□□□□□ -2.08
RFU1Q08003 YNL018CYNL018C 1839 nt2.05□□□□□ -2.08
RFU1Q08003 TMN3YER113C 2121 nt2.05□□□□□ -2.08
RFU1Q08003 MSH4YFL003C 2637 nt2.04□□□□□ -2.08
RFU1Q08003 MPC3YGR243W 441 nt2.04□□□□□ -2.08
RFU1Q08003 IKI1YHR187W 930 nt2.04□□□□□ -2.08
RFU1Q08003 RSM26YJR101W 801 nt2.04□□□□□ -2.08
RFU1Q08003 STE24YJR117W 1362 nt2.04□□□□□ -2.08
RFU1Q08003 UTP30YKR060W 825 nt2.04□□□□□ -2.08
RFU1Q08003 HAT1YPL001W 1125 nt2.04□□□□□ -2.08
RFU1Q08003 SEN54YPL083C 1404 nt2.04□□□□□ -2.08
RFU1Q08003 ARO7YPR060C 771 nt2.04□□□□□ -2.08
RFU1Q08003 CLB5YPR120C 1308 nt2.04□□□□□ -2.08
RFU1Q08003 VPS41YDR080W 2979 nt2.04□□□□□ -2.08
RFU1Q08003 MPS1YDL028C 2295 nt2.03□□□□□ -2.08
RFU1Q08003 STE11YLR362W 2154 nt2.03□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 15.2 ms