Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 YPR117WYPR117W 7470 nt2.47□□□□□ -2.01
RKR1Q04781 AIM23YJL131C 1071 nt2.47□□□□□ -2.01
RKR1Q04781 ENV10YLR065C 546 nt2.47□□□□□ -2.01
RKR1Q04781 YBT1YLL048C 4986 nt2.47□□□□□ -2.01
RKR1Q04781 MDS3YGL197W 4464 nt2.46□□□□□ -2.02
RKR1Q04781 NOP14YDL148C 2433 nt2.46□□□□□ -2.02
RKR1Q04781 PHO13YDL236W 939 nt2.45□□□□□ -2.02
RKR1Q04781 YOR146WYOR146W 306 nt2.45□□□□□ -2.02
RKR1Q04781 PKH3YDR466W 2697 nt2.45□□□□□ -2.02
RKR1Q04781 VPS3YDR495C 3036 nt2.45□□□□□ -2.02
RKR1Q04781 IRA1YBR140C 9279 nt2.44□□□□□ -2.02
RKR1Q04781 PCL8YPL219W 1479 nt2.44□□□□□ -2.02
RKR1Q04781 SYH1YPL105C 2550 nt2.44□□□□□ -2.02
RKR1Q04781 SKT5YBL061C 2091 nt2.44□□□□□ -2.02
RKR1Q04781 HMO1YDR174W 741 nt2.44□□□□□ -2.02
RKR1Q04781 OKP1YGR179C 1221 nt2.44□□□□□ -2.02
RKR1Q04781 YLR154C-HYLR154C-H 132 nt2.44□□□□□ -2.02
RKR1Q04781 YLR156C-AYLR156C-A 132 nt2.44□□□□□ -2.02
RKR1Q04781 YLR157C-CYLR157C-C 132 nt2.44□□□□□ -2.02
RKR1Q04781 YLR159C-AYLR159C-A 132 nt2.44□□□□□ -2.02
RKR1Q04781 YOR032W-AYOR032W-A 201 nt2.44□□□□□ -2.02
RKR1Q04781 IDH2YOR136W 1110 nt2.44□□□□□ -2.02
RKR1Q04781 YJR056CYJR056C 711 nt2.43□□□□□ -2.02
RKR1Q04781 YBL005W-BYBL005W-B 5268 nt2.43□□□□□ -2.02
RKR1Q04781 PFD1YJL179W 330 nt2.42□□□□□ -2.02
RKR1Q04781 BNI1YNL271C 5862 nt2.42□□□□□ -2.02
RKR1Q04781 SAE3YHR079C-A 276 nt2.41□□□□□ -2.02
RKR1Q04781 ATG7YHR171W 1893 nt2.41□□□□□ -2.02
RKR1Q04781 MDM10YAL010C 1482 nt2.41□□□□□ -2.02
RKR1Q04781 MCD1YDL003W 1701 nt2.41□□□□□ -2.02
RKR1Q04781 YGL132WYGL132W 336 nt2.4□□□□□ -2.02
RKR1Q04781 YML094C-AYML094C-A 402 nt2.4□□□□□ -2.02
RKR1Q04781 HMT1YBR034C 1047 nt2.4□□□□□ -2.02
RKR1Q04781 MFM1YPL060W 1242 nt2.4□□□□□ -2.02
RKR1Q04781 YPK1YKL126W 2043 nt2.4□□□□□ -2.03
RKR1Q04781 YOL057WYOL057W 2136 nt2.4□□□□□ -2.03
RKR1Q04781 PSD2YGR170W 3417 nt2.4□□□□□ -2.03
RKR1Q04781 YDL242WYDL242W 354 nt2.4□□□□□ -2.03
RKR1Q04781 CTK2YJL006C 972 nt2.4□□□□□ -2.03
RKR1Q04781 VMA9YCL005W-A 222 nt2.4□□□□□ -2.03
RKR1Q04781 SSF1YHR066W 1362 nt2.39□□□□□ -2.03
RKR1Q04781 TFC1YBR123C 1950 nt2.39□□□□□ -2.03
RKR1Q04781 YLR224WYLR224W 1110 nt2.39□□□□□ -2.03
RKR1Q04781 YGR293CYGR293C 462 nt2.38□□□□□ -2.03
RKR1Q04781 YJL015CYJL015C 285 nt2.38□□□□□ -2.03
RKR1Q04781 SPO20YMR017W 1194 nt2.38□□□□□ -2.03
RKR1Q04781 RAD50YNL250W 3939 nt2.38□□□□□ -2.03
RKR1Q04781 UBP3YER151C 2739 nt2.38□□□□□ -2.03
RKR1Q04781 UTP21YLR409C 2820 nt2.38□□□□□ -2.03
RKR1Q04781 ECM1YAL059W 639 nt2.37□□□□□ -2.03
RKR1Q04781 DSE3YOR264W 1293 nt2.36□□□□□ -2.03
RKR1Q04781 SWA2YDR320C 2007 nt2.36□□□□□ -2.03
RKR1Q04781 ATG34YOL083W 1239 nt2.36□□□□□ -2.03
RKR1Q04781 YOR097CYOR097C 528 nt2.36□□□□□ -2.03
RKR1Q04781 YOR114WYOR114W 885 nt2.36□□□□□ -2.03
RKR1Q04781 YAR1YPL239W 603 nt2.36□□□□□ -2.03
RKR1Q04781 AGE1YDR524C 1449 nt2.35□□□□□ -2.03
RKR1Q04781 YJR023CYJR023C 402 nt2.35□□□□□ -2.03
RKR1Q04781 SET6YPL165C 1122 nt2.35□□□□□ -2.03
RKR1Q04781 YGL176CYGL176C 1665 nt2.34□□□□□ -2.03
RKR1Q04781 PEX5YDR244W 1839 nt2.34□□□□□ -2.03
RKR1Q04781 GPP2YER062C 753 nt2.34□□□□□ -2.03
RKR1Q04781 SWC4YGR002C 1431 nt2.34□□□□□ -2.03
RKR1Q04781 YML003WYML003W 873 nt2.34□□□□□ -2.03
RKR1Q04781 YMR030W-AYMR030W-A 291 nt2.34□□□□□ -2.03
RKR1Q04781 YNL035CYNL035C 1170 nt2.34□□□□□ -2.03
RKR1Q04781 MPP6YNR024W 561 nt2.34□□□□□ -2.03
RKR1Q04781 PRP6YBR055C 2700 nt2.34□□□□□ -2.04
RKR1Q04781 PGS1YCL004W 1566 nt2.33□□□□□ -2.04
RKR1Q04781 PHO12YHR215W 1404 nt2.33□□□□□ -2.04
RKR1Q04781 PHO11YAR071W 1404 nt2.33□□□□□ -2.04
RKR1Q04781 DCG1YIR030C 735 nt2.33□□□□□ -2.04
RKR1Q04781 YPR177CYPR177C 372 nt2.33□□□□□ -2.04
RKR1Q04781 CSH1YBR161W 1131 nt2.33□□□□□ -2.04
RKR1Q04781 PEX21YGR239C 867 nt2.32□□□□□ -2.04
RKR1Q04781 YKR047WYKR047W 306 nt2.32□□□□□ -2.04
RKR1Q04781 HHF2YNL030W 312 nt2.32□□□□□ -2.04
RKR1Q04781 CNS1YBR155W 1158 nt2.32□□□□□ -2.04
RKR1Q04781 RRP7YCL031C 894 nt2.32□□□□□ -2.04
RKR1Q04781 GNT1YOR320C 1476 nt2.32□□□□□ -2.04
RKR1Q04781 LCB4YOR171C 1875 nt2.32□□□□□ -2.04
RKR1Q04781 APM3YBR288C 1452 nt2.32□□□□□ -2.04
RKR1Q04781 DID4YKL002W 699 nt2.32□□□□□ -2.04
RKR1Q04781 OST1YJL002C 1431 nt2.31□□□□□ -2.04
RKR1Q04781 TRX1YLR043C 312 nt2.31□□□□□ -2.04
RKR1Q04781 OSW5YMR148W 447 nt2.31□□□□□ -2.04
RKR1Q04781 TOR2YKL203C 7425 nt2.3□□□□□ -2.04
RKR1Q04781 YPR089WYPR089W 2667 nt2.3□□□□□ -2.04
RKR1Q04781 YBR139WYBR139W 1527 nt2.3□□□□□ -2.04
RKR1Q04781 YPR1YDR368W 939 nt2.3□□□□□ -2.04
RKR1Q04781 SSN8YNL025C 972 nt2.3□□□□□ -2.04
RKR1Q04781 HUA2YOR284W 732 nt2.3□□□□□ -2.04
RKR1Q04781 FYV8YGR196C 2454 nt2.29□□□□□ -2.04
RKR1Q04781 STE12YHR084W 2067 nt2.29□□□□□ -2.04
RKR1Q04781 NSE1YLR007W 1011 nt2.29□□□□□ -2.04
RKR1Q04781 TPO5YKL174C 1857 nt2.28□□□□□ -2.04
RKR1Q04781 ATP17YDR377W 306 nt2.28□□□□□ -2.04
RKR1Q04781 POC4YPL144W 447 nt2.28□□□□□ -2.04
RKR1Q04781 CWC22YGR278W 1734 nt2.28□□□□□ -2.04
RKR1Q04781 VPS54YDR027C 2670 nt2.27□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 23.7 ms