Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMGCS1Q01581 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMGCS1Q01581 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMGCS1Q01581 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.24■□□□□ 0.83
HMGCS1Q01581 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
HMGCS1Q01581 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HMGCS1Q01581 AC005224.4-201ENST00000583262 1652 ntBASIC20.24■□□□□ 0.83
HMGCS1Q01581 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMGCS1Q01581 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
HMGCS1Q01581 MIR572-201ENST00000384983 95 ntBASIC20.24■□□□□ 0.83
HMGCS1Q01581 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMGCS1Q01581 AC091305.1-201ENST00000479476 895 ntBASIC20.24■□□□□ 0.83
HMGCS1Q01581 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.24■□□□□ 0.83
HMGCS1Q01581 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMGCS1Q01581 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HMGCS1Q01581 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMGCS1Q01581 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMGCS1Q01581 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.23■□□□□ 0.83
HMGCS1Q01581 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.23■□□□□ 0.83
HMGCS1Q01581 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMGCS1Q01581 BX005040.4-201ENST00000637145 1518 ntBASIC20.23■□□□□ 0.83
HMGCS1Q01581 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMGCS1Q01581 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMGCS1Q01581 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
HMGCS1Q01581 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
HMGCS1Q01581 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HMGCS1Q01581 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.23■□□□□ 0.83
HMGCS1Q01581 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.23■□□□□ 0.83
HMGCS1Q01581 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
HMGCS1Q01581 AC005837.3-201ENST00000612163 286 ntBASIC20.23■□□□□ 0.83
HMGCS1Q01581 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMGCS1Q01581 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.23■□□□□ 0.83
HMGCS1Q01581 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.23■□□□□ 0.83
HMGCS1Q01581 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
HMGCS1Q01581 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
HMGCS1Q01581 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMGCS1Q01581 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMGCS1Q01581 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMGCS1Q01581 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMGCS1Q01581 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMGCS1Q01581 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGCS1Q01581 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
HMGCS1Q01581 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGCS1Q01581 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGCS1Q01581 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HMGCS1Q01581 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
HMGCS1Q01581 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.22■□□□□ 0.83
HMGCS1Q01581 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.22■□□□□ 0.83
HMGCS1Q01581 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.22■□□□□ 0.83
HMGCS1Q01581 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
HMGCS1Q01581 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.22■□□□□ 0.83
HMGCS1Q01581 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.22■□□□□ 0.83
HMGCS1Q01581 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.22■□□□□ 0.83
HMGCS1Q01581 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HMGCS1Q01581 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
HMGCS1Q01581 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGCS1Q01581 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.22■□□□□ 0.83
HMGCS1Q01581 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGCS1Q01581 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGCS1Q01581 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGCS1Q01581 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGCS1Q01581 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HMGCS1Q01581 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGCS1Q01581 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGCS1Q01581 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGCS1Q01581 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HMGCS1Q01581 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.21■□□□□ 0.83
HMGCS1Q01581 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGCS1Q01581 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGCS1Q01581 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.21■□□□□ 0.83
HMGCS1Q01581 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HMGCS1Q01581 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGCS1Q01581 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.21■□□□□ 0.83
HMGCS1Q01581 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGCS1Q01581 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGCS1Q01581 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
HMGCS1Q01581 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGCS1Q01581 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HMGCS1Q01581 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
HMGCS1Q01581 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.2■□□□□ 0.83
HMGCS1Q01581 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
HMGCS1Q01581 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.2■□□□□ 0.82
HMGCS1Q01581 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMGCS1Q01581 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMGCS1Q01581 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HMGCS1Q01581 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.2■□□□□ 0.82
HMGCS1Q01581 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.2■□□□□ 0.82
HMGCS1Q01581 SUDS3P1-201ENST00000505831 966 ntBASIC20.2■□□□□ 0.82
HMGCS1Q01581 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.2■□□□□ 0.82
HMGCS1Q01581 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HMGCS1Q01581 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMGCS1Q01581 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMGCS1Q01581 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
HMGCS1Q01581 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMGCS1Q01581 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.2■□□□□ 0.82
HMGCS1Q01581 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMGCS1Q01581 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMGCS1Q01581 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.19■□□□□ 0.82
HMGCS1Q01581 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.19■□□□□ 0.82
HMGCS1Q01581 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms