Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
NKX6-1P78426 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NKX6-1P78426 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
NKX6-1P78426 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NKX6-1P78426 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NKX6-1P78426 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
NKX6-1P78426 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
NKX6-1P78426 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NKX6-1P78426 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NKX6-1P78426 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.44■□□□□ 0.54
NKX6-1P78426 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NKX6-1P78426 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.44■□□□□ 0.54
NKX6-1P78426 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NKX6-1P78426 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.44■□□□□ 0.54
NKX6-1P78426 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.44■□□□□ 0.54
NKX6-1P78426 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.44■□□□□ 0.54
NKX6-1P78426 MFSD11-216ENST00000590393 1141 ntBASIC18.44■□□□□ 0.54
NKX6-1P78426 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
NKX6-1P78426 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.44■□□□□ 0.54
NKX6-1P78426 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.44■□□□□ 0.54
NKX6-1P78426 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.44■□□□□ 0.54
NKX6-1P78426 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
NKX6-1P78426 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.44■□□□□ 0.54
NKX6-1P78426 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
NKX6-1P78426 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.44■□□□□ 0.54
NKX6-1P78426 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
NKX6-1P78426 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NKX6-1P78426 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.44■□□□□ 0.54
NKX6-1P78426 AP006587.3-201ENST00000525742 1516 ntBASIC18.44■□□□□ 0.54
NKX6-1P78426 SLC25A24-204ENST00000569674 2357 ntBASIC18.44■□□□□ 0.54
NKX6-1P78426 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NKX6-1P78426 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NKX6-1P78426 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NKX6-1P78426 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NKX6-1P78426 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
NKX6-1P78426 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NKX6-1P78426 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.43■□□□□ 0.54
NKX6-1P78426 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NKX6-1P78426 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NKX6-1P78426 SLC29A4P1-201ENST00000398760 971 ntBASIC18.43■□□□□ 0.54
NKX6-1P78426 FAM201B-201ENST00000458407 597 ntBASIC18.43■□□□□ 0.54
NKX6-1P78426 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.43■□□□□ 0.54
NKX6-1P78426 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NKX6-1P78426 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
NKX6-1P78426 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
NKX6-1P78426 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.43■□□□□ 0.54
NKX6-1P78426 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.43■□□□□ 0.54
NKX6-1P78426 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NKX6-1P78426 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NKX6-1P78426 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NKX6-1P78426 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NKX6-1P78426 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NKX6-1P78426 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.43■□□□□ 0.54
NKX6-1P78426 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.43■□□□□ 0.54
NKX6-1P78426 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NKX6-1P78426 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NKX6-1P78426 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
NKX6-1P78426 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NKX6-1P78426 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.42■□□□□ 0.54
NKX6-1P78426 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NKX6-1P78426 AC007322.1-201ENST00000426983 750 ntBASIC18.42■□□□□ 0.54
NKX6-1P78426 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.42■□□□□ 0.54
NKX6-1P78426 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.42■□□□□ 0.54
NKX6-1P78426 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.42■□□□□ 0.54
NKX6-1P78426 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.42■□□□□ 0.54
NKX6-1P78426 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.42■□□□□ 0.54
NKX6-1P78426 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NKX6-1P78426 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
NKX6-1P78426 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
NKX6-1P78426 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.42■□□□□ 0.54
NKX6-1P78426 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
NKX6-1P78426 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NKX6-1P78426 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
NKX6-1P78426 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.41■□□□□ 0.54
NKX6-1P78426 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NKX6-1P78426 KRT87P-202ENST00000534226 1464 ntBASIC18.41■□□□□ 0.54
NKX6-1P78426 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.41■□□□□ 0.54
NKX6-1P78426 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NKX6-1P78426 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NKX6-1P78426 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.41■□□□□ 0.54
NKX6-1P78426 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NKX6-1P78426 AC005181.1-201ENST00000604782 1256 ntBASIC18.41■□□□□ 0.54
NKX6-1P78426 AL050303.2-201ENST00000619798 666 ntBASIC18.41■□□□□ 0.54
NKX6-1P78426 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.41■□□□□ 0.54
NKX6-1P78426 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.41■□□□□ 0.54
NKX6-1P78426 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
NKX6-1P78426 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
NKX6-1P78426 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NKX6-1P78426 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.41■□□□□ 0.54
NKX6-1P78426 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NKX6-1P78426 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.4■□□□□ 0.54
NKX6-1P78426 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NKX6-1P78426 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.4■□□□□ 0.54
NKX6-1P78426 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.4■□□□□ 0.54
NKX6-1P78426 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NKX6-1P78426 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NKX6-1P78426 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.4■□□□□ 0.54
NKX6-1P78426 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.4■□□□□ 0.54
NKX6-1P78426 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.4■□□□□ 0.54
NKX6-1P78426 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms