Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SEC61A1P61619 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SEC61A1P61619 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SEC61A1P61619 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
SEC61A1P61619 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.28■□□□□ 0.52
SEC61A1P61619 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SEC61A1P61619 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SEC61A1P61619 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SEC61A1P61619 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SEC61A1P61619 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SEC61A1P61619 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SEC61A1P61619 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SEC61A1P61619 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SEC61A1P61619 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.27■□□□□ 0.52
SEC61A1P61619 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.27■□□□□ 0.52
SEC61A1P61619 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SEC61A1P61619 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SEC61A1P61619 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.27■□□□□ 0.52
SEC61A1P61619 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SEC61A1P61619 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.27■□□□□ 0.52
SEC61A1P61619 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SEC61A1P61619 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SEC61A1P61619 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SEC61A1P61619 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SEC61A1P61619 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.27■□□□□ 0.51
SEC61A1P61619 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.27■□□□□ 0.51
SEC61A1P61619 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SEC61A1P61619 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.26■□□□□ 0.51
SEC61A1P61619 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.26■□□□□ 0.51
SEC61A1P61619 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEC61A1P61619 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEC61A1P61619 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEC61A1P61619 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEC61A1P61619 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEC61A1P61619 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEC61A1P61619 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.26■□□□□ 0.51
SEC61A1P61619 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SEC61A1P61619 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SEC61A1P61619 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.26■□□□□ 0.51
SEC61A1P61619 AC087623.3-201ENST00000607047 1098 ntBASIC18.26■□□□□ 0.51
SEC61A1P61619 MIR6084-201ENST00000622012 110 ntBASIC18.26■□□□□ 0.51
SEC61A1P61619 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.26■□□□□ 0.51
SEC61A1P61619 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEC61A1P61619 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.26■□□□□ 0.51
SEC61A1P61619 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEC61A1P61619 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SEC61A1P61619 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
SEC61A1P61619 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.26■□□□□ 0.51
SEC61A1P61619 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEC61A1P61619 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEC61A1P61619 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEC61A1P61619 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.25■□□□□ 0.51
SEC61A1P61619 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SEC61A1P61619 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.25■□□□□ 0.51
SEC61A1P61619 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SEC61A1P61619 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SEC61A1P61619 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SEC61A1P61619 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.25■□□□□ 0.51
SEC61A1P61619 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SEC61A1P61619 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SEC61A1P61619 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SEC61A1P61619 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.25■□□□□ 0.51
SEC61A1P61619 MIR572-201ENST00000384983 95 ntBASIC18.25■□□□□ 0.51
SEC61A1P61619 AC097381.1-201ENST00000429019 1296 ntBASIC18.25■□□□□ 0.51
SEC61A1P61619 AP005435.1-201ENST00000529293 1178 ntBASIC18.25■□□□□ 0.51
SEC61A1P61619 MIR6821-201ENST00000617625 74 ntBASIC18.25■□□□□ 0.51
SEC61A1P61619 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.25■□□□□ 0.51
SEC61A1P61619 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SEC61A1P61619 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SEC61A1P61619 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SEC61A1P61619 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SEC61A1P61619 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SEC61A1P61619 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SEC61A1P61619 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SEC61A1P61619 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SEC61A1P61619 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.24■□□□□ 0.51
SEC61A1P61619 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.24■□□□□ 0.51
SEC61A1P61619 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SEC61A1P61619 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.24■□□□□ 0.51
SEC61A1P61619 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.24■□□□□ 0.51
SEC61A1P61619 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.24■□□□□ 0.51
SEC61A1P61619 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.24■□□□□ 0.51
SEC61A1P61619 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SEC61A1P61619 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SEC61A1P61619 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.24■□□□□ 0.51
SEC61A1P61619 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SEC61A1P61619 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SEC61A1P61619 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SEC61A1P61619 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SEC61A1P61619 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SEC61A1P61619 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SEC61A1P61619 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.23■□□□□ 0.51
SEC61A1P61619 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.23■□□□□ 0.51
SEC61A1P61619 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.23■□□□□ 0.51
SEC61A1P61619 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.23■□□□□ 0.51
SEC61A1P61619 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.23■□□□□ 0.51
SEC61A1P61619 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SEC61A1P61619 AC244015.2-201ENST00000616358 1861 ntBASIC18.23■□□□□ 0.51
SEC61A1P61619 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SEC61A1P61619 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms