Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.79■□□□□ 0.92
CDKN2DP55273 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.79■□□□□ 0.92
CDKN2DP55273 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDKN2DP55273 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDKN2DP55273 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.79■□□□□ 0.92
CDKN2DP55273 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDKN2DP55273 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDKN2DP55273 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.78■□□□□ 0.92
CDKN2DP55273 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDKN2DP55273 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.78■□□□□ 0.92
CDKN2DP55273 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDKN2DP55273 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDKN2DP55273 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CDKN2DP55273 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.78■□□□□ 0.92
CDKN2DP55273 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.78■□□□□ 0.92
CDKN2DP55273 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDKN2DP55273 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.78■□□□□ 0.92
CDKN2DP55273 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDKN2DP55273 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
CDKN2DP55273 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CDKN2DP55273 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDKN2DP55273 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.78■□□□□ 0.92
CDKN2DP55273 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CDKN2DP55273 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CDKN2DP55273 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDKN2DP55273 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.77■□□□□ 0.92
CDKN2DP55273 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDKN2DP55273 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.77■□□□□ 0.92
CDKN2DP55273 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CDKN2DP55273 IRS3P-201ENST00000223076 1006 ntBASIC20.77■□□□□ 0.92
CDKN2DP55273 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDKN2DP55273 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDKN2DP55273 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDKN2DP55273 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDKN2DP55273 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CDKN2DP55273 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CDKN2DP55273 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CDKN2DP55273 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.76■□□□□ 0.91
CDKN2DP55273 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CDKN2DP55273 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CDKN2DP55273 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDKN2DP55273 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDKN2DP55273 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDKN2DP55273 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CDKN2DP55273 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDKN2DP55273 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.76■□□□□ 0.91
CDKN2DP55273 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.76■□□□□ 0.91
CDKN2DP55273 EEF1DP3-203ENST00000566025 782 ntBASIC20.76■□□□□ 0.91
CDKN2DP55273 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CDKN2DP55273 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.76■□□□□ 0.91
CDKN2DP55273 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CDKN2DP55273 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CDKN2DP55273 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CDKN2DP55273 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDKN2DP55273 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDKN2DP55273 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDKN2DP55273 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDKN2DP55273 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.75■□□□□ 0.91
CDKN2DP55273 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDKN2DP55273 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDKN2DP55273 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDKN2DP55273 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDKN2DP55273 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDKN2DP55273 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.75■□□□□ 0.91
CDKN2DP55273 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDKN2DP55273 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.75■□□□□ 0.91
CDKN2DP55273 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDKN2DP55273 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDKN2DP55273 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDKN2DP55273 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDKN2DP55273 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDKN2DP55273 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDKN2DP55273 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDKN2DP55273 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CDKN2DP55273 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDKN2DP55273 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.74■□□□□ 0.91
CDKN2DP55273 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDKN2DP55273 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.74■□□□□ 0.91
CDKN2DP55273 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDKN2DP55273 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CDKN2DP55273 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.73■□□□□ 0.91
CDKN2DP55273 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.73■□□□□ 0.91
CDKN2DP55273 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDKN2DP55273 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDKN2DP55273 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDKN2DP55273 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDKN2DP55273 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDKN2DP55273 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
CDKN2DP55273 AC053503.5-201ENST00000601508 636 ntBASIC20.73■□□□□ 0.91
CDKN2DP55273 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CDKN2DP55273 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CDKN2DP55273 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CDKN2DP55273 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.73■□□□□ 0.91
CDKN2DP55273 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDKN2DP55273 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.73■□□□□ 0.91
CDKN2DP55273 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDKN2DP55273 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDKN2DP55273 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDKN2DP55273 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDKN2DP55273 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms