Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 CACNA2D4-223ENST00000588077 3311 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.043e-7■■■□□ 19
NCBP2P52298 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.63■□□□□ 0.892e-20■■■□□ 19
NCBP2P52298 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.532e-20■■■□□ 19
NCBP2P52298 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.022e-20■■■□□ 19
NCBP2P52298 SLC16A3-218ENST00000583444 2882 nt18.02■□□□□ 0.482e-7■■■□□ 19
NCBP2P52298 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.139e-14■■■□□ 19
NCBP2P52298 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC22.06■■□□□ 1.129e-14■■■□□ 19
NCBP2P52298 OXLD1-206ENST00000575963 1600 nt21.06■□□□□ 0.969e-14■■■□□ 19
NCBP2P52298 OXLD1-204ENST00000571757 923 ntTSL 219.86■□□□□ 0.779e-14■■■□□ 19
NCBP2P52298 OXLD1-202ENST00000571092 553 ntTSL 218.59■□□□□ 0.579e-14■■■□□ 19
NCBP2P52298 OXLD1-207ENST00000575992 821 ntTSL 217.51■□□□□ 0.399e-14■■■□□ 19
NCBP2P52298 FASTK-213ENST00000482806 1826 ntTSL 521.32■■□□□ 18e-15■■■□□ 18.9
NCBP2P52298 FASTK-215ENST00000489884 1751 ntTSL 1 (best)20.64■□□□□ 0.98e-15■■■□□ 18.9
NCBP2P52298 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.34■□□□□ 0.858e-15■■■□□ 18.9
NCBP2P52298 FASTK-216ENST00000496663 818 ntTSL 220.24■□□□□ 0.838e-15■■■□□ 18.9
NCBP2P52298 FASTK-205ENST00000461979 720 ntTSL 519.57■□□□□ 0.728e-15■■■□□ 18.9
NCBP2P52298 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.32■□□□□ 0.688e-15■■■□□ 18.9
NCBP2P52298 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.688e-15■■■□□ 18.9
NCBP2P52298 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.96■□□□□ 0.38e-15■■■□□ 18.9
NCBP2P52298 FASTK-204ENST00000460980 1521 ntTSL 514.68□□□□□ -0.068e-15■■■□□ 18.9
NCBP2P52298 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.97e-7■■■□□ 18.9
NCBP2P52298 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.71■□□□□ 0.751e-12■■■□□ 18.9
NCBP2P52298 AC073210.2-201ENST00000430369 194 ntBASIC18.59■□□□□ 0.572e-9■■■□□ 18.9
NCBP2P52298 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC13.23□□□□□ -0.292e-9■■■□□ 18.9
NCBP2P52298 CCT6P3-202ENST00000426828 2238 ntTSL 1 (best) BASIC10.57□□□□□ -0.722e-9■■■□□ 18.9
NCBP2P52298 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.982e-8■■■□□ 18.9
NCBP2P52298 ANKS6-205ENST00000471846 1103 ntTSL 220.54■□□□□ 0.882e-8■■■□□ 18.9
NCBP2P52298 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.7□□□□□ -0.062e-8■■■□□ 18.9
NCBP2P52298 BSG-212ENST00000590218 545 ntTSL 217.93■□□□□ 0.462e-6■■■□□ 18.9
NCBP2P52298 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.412e-6■■■□□ 18.9
NCBP2P52298 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.03■□□□□ 0.162e-6■■■□□ 18.9
NCBP2P52298 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.92■□□□□ 0.142e-6■■■□□ 18.9
NCBP2P52298 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.79■□□□□ 0.122e-6■■■□□ 18.9
NCBP2P52298 BSG-210ENST00000576925 611 ntTSL 215.41■□□□□ 0.062e-6■■■□□ 18.9
NCBP2P52298 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.35■□□□□ 0.052e-6■■■□□ 18.9
NCBP2P52298 BSG-207ENST00000573216 545 ntTSL 415.1■□□□□ 0.012e-6■■■□□ 18.9
NCBP2P52298 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.78□□□□□ -0.042e-6■■■□□ 18.9
NCBP2P52298 BSG-213ENST00000613627 689 ntTSL 314.69□□□□□ -0.062e-6■■■□□ 18.9
NCBP2P52298 BSG-206ENST00000572899 582 ntTSL 214.62□□□□□ -0.072e-6■■■□□ 18.9
NCBP2P52298 CCDC84-203ENST00000526463 1295 ntTSL 1 (best)19.05■□□□□ 0.648e-9■■■□□ 18.9
NCBP2P52298 CCDC84-202ENST00000524670 885 ntTSL 516.02■□□□□ 0.168e-9■■■□□ 18.9
NCBP2P52298 CCDC84-206ENST00000532132 1119 ntTSL 1 (best)15.83■□□□□ 0.128e-9■■■□□ 18.9
NCBP2P52298 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.018e-9■■■□□ 18.9
NCBP2P52298 CCDC84-208ENST00000534656 588 ntTSL 212.46□□□□□ -0.418e-9■■■□□ 18.9
NCBP2P52298 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.92■□□□□ 0.625e-9■■■□□ 18.9
NCBP2P52298 TAF7-203ENST00000624761 603 ntTSL 418.69■□□□□ 0.585e-9■■■□□ 18.9
NCBP2P52298 TEX14-202ENST00000349033 4773 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.775e-9■■■□□ 18.9
NCBP2P52298 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.175e-9■■■□□ 18.9
NCBP2P52298 TEX14-205ENST00000582740 4834 ntTSL 1 (best)7.08□□□□□ -1.285e-9■■■□□ 18.9
NCBP2P52298 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.35e-9■■■□□ 18.9
NCBP2P52298 SKI-202ENST00000478223 294 ntTSL 310.72□□□□□ -0.694e-7■■■□□ 18.9
NCBP2P52298 UBC-203ENST00000535859 582 ntTSL 213.03□□□□□ -0.321e-6■■■□□ 18.9
NCBP2P52298 UBC-214ENST00000546271 559 ntTSL 410.97□□□□□ -0.651e-6■■■□□ 18.9
NCBP2P52298 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.442e-10■■■□□ 18.9
NCBP2P52298 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.732e-10■■■□□ 18.9
NCBP2P52298 CCL20-204ENST00000489160 673 ntTSL 33.43□□□□□ -1.862e-10■■■□□ 18.9
NCBP2P52298 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.171e-16■■■□□ 18.9
NCBP2P52298 BLOC1S5-201ENST00000244777 2445 ntTSL 1 (best)15.26■□□□□ 0.031e-16■■■□□ 18.9
NCBP2P52298 BLOC1S5-206ENST00000627748 1273 ntTSL 1 (best)13.68□□□□□ -0.221e-16■■■□□ 18.9
NCBP2P52298 BLOC1S5-TXNDC5-201ENST00000439343 3030 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.581e-16■■■□□ 18.9
NCBP2P52298 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC10.99□□□□□ -0.651e-16■■■□□ 18.9
NCBP2P52298 SESTD1-203ENST00000428443 10615 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.976e-9■■■□□ 18.9
NCBP2P52298 SESTD1-207ENST00000452991 460 ntTSL 38.32□□□□□ -1.086e-9■■■□□ 18.9
NCBP2P52298 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.74□□□□□ -0.219e-7■■■□□ 18.9
NCBP2P52298 C1QTNF1-AS1-201ENST00000577521 583 ntTSL 411.81□□□□□ -0.529e-7■■■□□ 18.9
NCBP2P52298 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.68■■□□□ 1.069e-10■■■□□ 18.8
NCBP2P52298 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.16■□□□□ 0.829e-10■■■□□ 18.8
NCBP2P52298 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.29■□□□□ 0.689e-10■■■□□ 18.8
NCBP2P52298 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.369e-10■■■□□ 18.8
NCBP2P52298 HSCB-204ENST00000450178 1048 ntTSL 315.95■□□□□ 0.149e-10■■■□□ 18.8
NCBP2P52298 HSCB-206ENST00000485599 656 ntTSL 512.65□□□□□ -0.389e-10■■■□□ 18.8
NCBP2P52298 LSM8-201ENST00000249299 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.469e-10■■■□□ 18.8
NCBP2P52298 HSCB-203ENST00000420442 792 ntTSL 511.61□□□□□ -0.559e-10■■■□□ 18.8
NCBP2P52298 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.86□□□□□ -1.319e-10■■■□□ 18.8
NCBP2P52298 LSM8-202ENST00000411938 290 ntTSL 35.99□□□□□ -1.459e-10■■■□□ 18.8
NCBP2P52298 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.093e-12■■■□□ 18.8
NCBP2P52298 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.693e-12■■■□□ 18.8
NCBP2P52298 TRIM13-203ENST00000378183 1251 ntTSL 218.97■□□□□ 0.639e-8■■■□□ 18.8
NCBP2P52298 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.39e-8■■■□□ 18.8
NCBP2P52298 TRIM13-208ENST00000478111 478 ntTSL 215.05■□□□□ -09e-8■■■□□ 18.8
NCBP2P52298 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.029e-8■■■□□ 18.8
NCBP2P52298 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.099e-8■■■□□ 18.8
NCBP2P52298 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.189e-8■■■□□ 18.8
NCBP2P52298 TRIM13-205ENST00000442421 692 ntTSL 511.41□□□□□ -0.589e-8■■■□□ 18.8
NCBP2P52298 TRIM13-207ENST00000474805 403 ntTSL 510.96□□□□□ -0.659e-8■■■□□ 18.8
NCBP2P52298 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.041e-7■■■□□ 18.8
NCBP2P52298 HDHD3-203ENST00000485934 913 ntTSL 214.29□□□□□ -0.121e-7■■■□□ 18.8
NCBP2P52298 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.062e-7■■■□□ 18.7
NCBP2P52298 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.262e-7■■■□□ 18.7
NCBP2P52298 BMP4-208ENST00000559642 505 ntTSL 311.85□□□□□ -0.512e-7■■■□□ 18.7
NCBP2P52298 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.44■□□□□ 0.545e-7■■■□□ 18.7
NCBP2P52298 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.36■□□□□ 0.535e-7■■■□□ 18.7
NCBP2P52298 MTX1-203ENST00000424959 946 ntTSL 517.37■□□□□ 0.375e-7■■■□□ 18.7
NCBP2P52298 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.045e-7■■■□□ 18.7
NCBP2P52298 MTX1-204ENST00000481771 2579 ntTSL 213.87□□□□□ -0.195e-7■■■□□ 18.7
NCBP2P52298 PECR-207ENST00000487318 742 ntTSL 513.76□□□□□ -0.215e-14■■■□□ 18.7
NCBP2P52298 PECR-208ENST00000497889 824 ntTSL 513.15□□□□□ -0.35e-14■■■□□ 18.7
NCBP2P52298 PECR-202ENST00000442122 1100 ntTSL 212.7□□□□□ -0.385e-14■■■□□ 18.7
NCBP2P52298 PECR-201ENST00000265322 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.45e-14■■■□□ 18.7
NCBP2P52298 PECR-206ENST00000474093 585 ntTSL 212.32□□□□□ -0.445e-14■■■□□ 18.7
Retrieved 100 of 18,329 protein–RNA pairs in 165.3 ms