Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLCN4P51793 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.22■■□□□ 1.15
CLCN4P51793 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
CLCN4P51793 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CLCN4P51793 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.22■■□□□ 1.15
CLCN4P51793 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
CLCN4P51793 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC22.22■■□□□ 1.15
CLCN4P51793 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.22■■□□□ 1.15
CLCN4P51793 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC22.22■■□□□ 1.15
CLCN4P51793 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.22■■□□□ 1.15
CLCN4P51793 AC003102.1-202ENST00000563394 1796 ntBASIC22.22■■□□□ 1.15
CLCN4P51793 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CLCN4P51793 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
CLCN4P51793 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLCN4P51793 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CLCN4P51793 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLCN4P51793 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLCN4P51793 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
CLCN4P51793 GCSHP5-201ENST00000443090 522 ntBASIC22.21■■□□□ 1.15
CLCN4P51793 OR2A1-AS1-201ENST00000462305 773 ntBASIC22.21■■□□□ 1.15
CLCN4P51793 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC22.21■■□□□ 1.15
CLCN4P51793 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC22.21■■□□□ 1.15
CLCN4P51793 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CLCN4P51793 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CLCN4P51793 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLCN4P51793 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLCN4P51793 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
CLCN4P51793 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CLCN4P51793 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
CLCN4P51793 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
CLCN4P51793 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CLCN4P51793 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CLCN4P51793 MMAB-206ENST00000540016 945 ntTSL 3 BASIC22.2■■□□□ 1.14
CLCN4P51793 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
CLCN4P51793 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC22.2■■□□□ 1.14
CLCN4P51793 INO80E-214ENST00000620599 515 ntTSL 2 BASIC22.2■■□□□ 1.14
CLCN4P51793 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CLCN4P51793 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.2■■□□□ 1.14
CLCN4P51793 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CLCN4P51793 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CLCN4P51793 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CLCN4P51793 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
CLCN4P51793 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CLCN4P51793 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CLCN4P51793 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.19■■□□□ 1.14
CLCN4P51793 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CLCN4P51793 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC22.19■■□□□ 1.14
CLCN4P51793 SERPINH1P1-201ENST00000419794 1249 ntBASIC22.19■■□□□ 1.14
CLCN4P51793 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
CLCN4P51793 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.19■■□□□ 1.14
CLCN4P51793 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
CLCN4P51793 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC22.19■■□□□ 1.14
CLCN4P51793 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC22.19■■□□□ 1.14
CLCN4P51793 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CLCN4P51793 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CLCN4P51793 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CLCN4P51793 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CLCN4P51793 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
CLCN4P51793 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.18■■□□□ 1.14
CLCN4P51793 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.18■■□□□ 1.14
CLCN4P51793 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.18■■□□□ 1.14
CLCN4P51793 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CLCN4P51793 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CLCN4P51793 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CLCN4P51793 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CLCN4P51793 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CLCN4P51793 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CLCN4P51793 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CLCN4P51793 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
CLCN4P51793 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
CLCN4P51793 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC22.18■■□□□ 1.14
CLCN4P51793 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC22.18■■□□□ 1.14
CLCN4P51793 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC22.18■■□□□ 1.14
CLCN4P51793 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC22.18■■□□□ 1.14
CLCN4P51793 AC006058.3-201ENST00000606217 1069 ntBASIC22.18■■□□□ 1.14
CLCN4P51793 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CLCN4P51793 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CLCN4P51793 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CLCN4P51793 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CLCN4P51793 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CLCN4P51793 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CLCN4P51793 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CLCN4P51793 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.17■■□□□ 1.14
CLCN4P51793 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CLCN4P51793 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC22.17■■□□□ 1.14
CLCN4P51793 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC22.17■■□□□ 1.14
CLCN4P51793 AC128676.1-201ENST00000454392 318 ntBASIC22.17■■□□□ 1.14
CLCN4P51793 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CLCN4P51793 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CLCN4P51793 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC22.17■■□□□ 1.14
CLCN4P51793 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC22.17■■□□□ 1.14
CLCN4P51793 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CLCN4P51793 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CLCN4P51793 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.17■■□□□ 1.14
CLCN4P51793 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.16■■□□□ 1.14
CLCN4P51793 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.16■■□□□ 1.14
CLCN4P51793 C9orf163-202ENST00000624034 2573 ntBASIC22.16■■□□□ 1.14
CLCN4P51793 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.16■■□□□ 1.14
CLCN4P51793 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.16■■□□□ 1.14
CLCN4P51793 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms