Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 AC105233.4-201ENST00000642045 216 ntBASIC20.28■□□□□ 0.84
CLCN2P51788 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.28■□□□□ 0.84
CLCN2P51788 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN2P51788 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN2P51788 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN2P51788 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN2P51788 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN2P51788 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCN2P51788 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCN2P51788 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCN2P51788 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.27■□□□□ 0.84
CLCN2P51788 FEM1AP4-201ENST00000443167 1987 ntBASIC20.27■□□□□ 0.84
CLCN2P51788 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCN2P51788 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCN2P51788 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCN2P51788 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.27■□□□□ 0.84
CLCN2P51788 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCN2P51788 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.27■□□□□ 0.84
CLCN2P51788 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.27■□□□□ 0.84
CLCN2P51788 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.27■□□□□ 0.84
CLCN2P51788 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCN2P51788 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CLCN2P51788 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCN2P51788 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
CLCN2P51788 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
CLCN2P51788 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CLCN2P51788 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CLCN2P51788 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.27■□□□□ 0.83
CLCN2P51788 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN2P51788 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CLCN2P51788 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.26■□□□□ 0.83
CLCN2P51788 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.26■□□□□ 0.83
CLCN2P51788 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.26■□□□□ 0.83
CLCN2P51788 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN2P51788 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.26■□□□□ 0.83
CLCN2P51788 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN2P51788 AC026271.2-201ENST00000428091 497 ntBASIC20.26■□□□□ 0.83
CLCN2P51788 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN2P51788 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN2P51788 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.26■□□□□ 0.83
CLCN2P51788 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN2P51788 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN2P51788 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN2P51788 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CLCN2P51788 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN2P51788 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN2P51788 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CLCN2P51788 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN2P51788 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN2P51788 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.25■□□□□ 0.83
CLCN2P51788 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN2P51788 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN2P51788 AC097381.1-201ENST00000429019 1296 ntBASIC20.25■□□□□ 0.83
CLCN2P51788 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.25■□□□□ 0.83
CLCN2P51788 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.25■□□□□ 0.83
CLCN2P51788 MIR6821-201ENST00000617625 74 ntBASIC20.25■□□□□ 0.83
CLCN2P51788 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.25■□□□□ 0.83
CLCN2P51788 OXCT2P1-201ENST00000447263 1535 ntBASIC20.25■□□□□ 0.83
CLCN2P51788 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN2P51788 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.25■□□□□ 0.83
CLCN2P51788 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN2P51788 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CLCN2P51788 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN2P51788 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN2P51788 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.25■□□□□ 0.83
CLCN2P51788 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.25■□□□□ 0.83
CLCN2P51788 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN2P51788 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CLCN2P51788 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN2P51788 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.24■□□□□ 0.83
CLCN2P51788 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.24■□□□□ 0.83
CLCN2P51788 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN2P51788 AC027612.3-201ENST00000413684 1047 ntBASIC20.24■□□□□ 0.83
CLCN2P51788 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.24■□□□□ 0.83
CLCN2P51788 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN2P51788 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN2P51788 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN2P51788 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CLCN2P51788 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN2P51788 Z98882.1-201ENST00000622160 2253 ntBASIC20.24■□□□□ 0.83
CLCN2P51788 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN2P51788 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN2P51788 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN2P51788 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.24■□□□□ 0.83
CLCN2P51788 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN2P51788 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN2P51788 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CLCN2P51788 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCN2P51788 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCN2P51788 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.23■□□□□ 0.83
CLCN2P51788 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCN2P51788 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCN2P51788 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCN2P51788 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCN2P51788 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.23■□□□□ 0.83
CLCN2P51788 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.23■□□□□ 0.83
CLCN2P51788 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCN2P51788 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLCN2P51788 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.23■□□□□ 0.83
CLCN2P51788 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms