Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC13.3□□□□□ -0.28
UBE2AP49459 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC13.3□□□□□ -0.28
UBE2AP49459 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC13.3□□□□□ -0.28
UBE2AP49459 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC13.3□□□□□ -0.28
UBE2AP49459 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2AP49459 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2AP49459 PKD1P1-201ENST00000458669 6805 ntBASIC13.3□□□□□ -0.28
UBE2AP49459 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2AP49459 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2AP49459 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2AP49459 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
UBE2AP49459 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
UBE2AP49459 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2AP49459 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2AP49459 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2AP49459 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2AP49459 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2AP49459 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC13.29□□□□□ -0.28
UBE2AP49459 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2AP49459 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2AP49459 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC13.29□□□□□ -0.28
UBE2AP49459 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC13.29□□□□□ -0.28
UBE2AP49459 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC13.29□□□□□ -0.28
UBE2AP49459 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC13.29□□□□□ -0.28
UBE2AP49459 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2AP49459 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2AP49459 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2AP49459 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2AP49459 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
UBE2AP49459 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
UBE2AP49459 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC13.29□□□□□ -0.28
UBE2AP49459 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
UBE2AP49459 SLC47A1P1-202ENST00000449666 945 ntBASIC13.29□□□□□ -0.28
UBE2AP49459 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC13.29□□□□□ -0.28
UBE2AP49459 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC13.29□□□□□ -0.28
UBE2AP49459 AP005435.1-201ENST00000529293 1178 ntBASIC13.29□□□□□ -0.28
UBE2AP49459 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC13.29□□□□□ -0.28
UBE2AP49459 AC104564.3-201ENST00000582367 638 ntBASIC13.29□□□□□ -0.28
UBE2AP49459 AL136162.1-201ENST00000607711 1078 ntBASIC13.29□□□□□ -0.28
UBE2AP49459 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2AP49459 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2AP49459 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2AP49459 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC13.29□□□□□ -0.28
UBE2AP49459 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2AP49459 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2AP49459 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC13.29□□□□□ -0.28
UBE2AP49459 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2AP49459 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
UBE2AP49459 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
UBE2AP49459 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC13.29□□□□□ -0.28
UBE2AP49459 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2AP49459 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2AP49459 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC13.28□□□□□ -0.28
UBE2AP49459 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2AP49459 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2AP49459 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2AP49459 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2AP49459 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
UBE2AP49459 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2AP49459 AC126544.1-201ENST00000580842 1059 ntBASIC13.28□□□□□ -0.28
UBE2AP49459 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2AP49459 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC13.28□□□□□ -0.28
UBE2AP49459 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC13.28□□□□□ -0.28
UBE2AP49459 USP48-205ENST00000421625 2818 ntTSL 2 BASIC13.28□□□□□ -0.28
UBE2AP49459 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2AP49459 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC13.28□□□□□ -0.28
UBE2AP49459 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
UBE2AP49459 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2AP49459 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2AP49459 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBE2AP49459 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBE2AP49459 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
UBE2AP49459 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
UBE2AP49459 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBE2AP49459 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBE2AP49459 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
UBE2AP49459 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
UBE2AP49459 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2AP49459 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2AP49459 MIR4767-201ENST00000582827 78 ntBASIC13.27□□□□□ -0.29
UBE2AP49459 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.29
UBE2AP49459 AC135279.3-201ENST00000610945 1311 ntBASIC13.27□□□□□ -0.29
UBE2AP49459 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2AP49459 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2AP49459 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2AP49459 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
UBE2AP49459 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
UBE2AP49459 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.29
UBE2AP49459 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
UBE2AP49459 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
UBE2AP49459 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2AP49459 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
UBE2AP49459 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2AP49459 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2AP49459 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2AP49459 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC13.26□□□□□ -0.29
UBE2AP49459 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2AP49459 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
UBE2AP49459 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
UBE2AP49459 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms