Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATRXP46100 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATRXP46100 RBM17P2-201ENST00000616397 1405 ntBASIC19.41■□□□□ 0.7
ATRXP46100 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATRXP46100 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.41■□□□□ 0.7
ATRXP46100 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATRXP46100 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATRXP46100 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.41■□□□□ 0.7
ATRXP46100 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.41■□□□□ 0.7
ATRXP46100 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.41■□□□□ 0.7
ATRXP46100 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATRXP46100 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATRXP46100 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATRXP46100 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATRXP46100 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATRXP46100 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.41■□□□□ 0.7
ATRXP46100 AL450487.1-201ENST00000426799 995 ntBASIC19.41■□□□□ 0.7
ATRXP46100 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.41■□□□□ 0.7
ATRXP46100 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.41■□□□□ 0.7
ATRXP46100 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATRXP46100 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.4■□□□□ 0.7
ATRXP46100 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATRXP46100 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATRXP46100 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ATRXP46100 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.4■□□□□ 0.7
ATRXP46100 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.4■□□□□ 0.7
ATRXP46100 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ATRXP46100 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.4■□□□□ 0.7
ATRXP46100 KRT17P1-201ENST00000399211 1546 ntBASIC19.4■□□□□ 0.7
ATRXP46100 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATRXP46100 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATRXP46100 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATRXP46100 AC105020.6-201ENST00000621523 1217 ntBASIC19.4■□□□□ 0.7
ATRXP46100 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATRXP46100 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ATRXP46100 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ATRXP46100 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ATRXP46100 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
ATRXP46100 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATRXP46100 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ATRXP46100 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.39■□□□□ 0.69
ATRXP46100 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.39■□□□□ 0.69
ATRXP46100 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATRXP46100 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATRXP46100 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATRXP46100 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATRXP46100 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATRXP46100 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
ATRXP46100 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.39■□□□□ 0.69
ATRXP46100 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATRXP46100 AL355472.2-201ENST00000422958 438 ntBASIC19.39■□□□□ 0.69
ATRXP46100 PNMA6B-201ENST00000538162 1200 ntBASIC19.39■□□□□ 0.69
ATRXP46100 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
ATRXP46100 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATRXP46100 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATRXP46100 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.38■□□□□ 0.69
ATRXP46100 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATRXP46100 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.38■□□□□ 0.69
ATRXP46100 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATRXP46100 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATRXP46100 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ATRXP46100 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ATRXP46100 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATRXP46100 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.37■□□□□ 0.69
ATRXP46100 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
ATRXP46100 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATRXP46100 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.37■□□□□ 0.69
ATRXP46100 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATRXP46100 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATRXP46100 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATRXP46100 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATRXP46100 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.37■□□□□ 0.69
ATRXP46100 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ATRXP46100 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATRXP46100 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATRXP46100 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATRXP46100 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.37■□□□□ 0.69
ATRXP46100 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATRXP46100 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.36■□□□□ 0.69
ATRXP46100 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ATRXP46100 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.36■□□□□ 0.69
ATRXP46100 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.36■□□□□ 0.69
ATRXP46100 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATRXP46100 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATRXP46100 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATRXP46100 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ATRXP46100 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATRXP46100 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.36■□□□□ 0.69
ATRXP46100 CRYGFP-201ENST00000418459 633 ntBASIC19.36■□□□□ 0.69
ATRXP46100 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.36■□□□□ 0.69
ATRXP46100 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ATRXP46100 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.36■□□□□ 0.69
ATRXP46100 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATRXP46100 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
ATRXP46100 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATRXP46100 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
ATRXP46100 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.36■□□□□ 0.69
ATRXP46100 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATRXP46100 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATRXP46100 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms