Protein–RNA interactions for Protein: P40616

ARL1, ADP-ribosylation factor-like protein 1, humanhuman

Predicted RBP Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARL1P40616 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ARL1P40616 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.7■□□□□ 0.9
ARL1P40616 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ARL1P40616 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.7■□□□□ 0.9
ARL1P40616 AC008764.7-201ENST00000593779 1081 ntBASIC20.7■□□□□ 0.9
ARL1P40616 AC233992.3-201ENST00000607491 485 ntBASIC20.7■□□□□ 0.9
ARL1P40616 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ARL1P40616 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ARL1P40616 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.7■□□□□ 0.9
ARL1P40616 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ARL1P40616 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ARL1P40616 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ARL1P40616 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ARL1P40616 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.69■□□□□ 0.9
ARL1P40616 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ARL1P40616 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
ARL1P40616 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.69■□□□□ 0.9
ARL1P40616 PBX2P1-201ENST00000493219 1291 ntBASIC20.69■□□□□ 0.9
ARL1P40616 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.69■□□□□ 0.9
ARL1P40616 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
ARL1P40616 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ARL1P40616 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ARL1P40616 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
ARL1P40616 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ARL1P40616 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.69■□□□□ 0.9
ARL1P40616 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.69■□□□□ 0.9
ARL1P40616 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
ARL1P40616 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ARL1P40616 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.68■□□□□ 0.9
ARL1P40616 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ARL1P40616 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.68■□□□□ 0.9
ARL1P40616 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ARL1P40616 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ARL1P40616 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ARL1P40616 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.68■□□□□ 0.9
ARL1P40616 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.68■□□□□ 0.9
ARL1P40616 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ARL1P40616 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ARL1P40616 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ARL1P40616 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.68■□□□□ 0.9
ARL1P40616 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ARL1P40616 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ARL1P40616 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ARL1P40616 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ARL1P40616 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ARL1P40616 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ARL1P40616 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.68■□□□□ 0.9
ARL1P40616 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ARL1P40616 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ARL1P40616 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.68■□□□□ 0.9
ARL1P40616 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ARL1P40616 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ARL1P40616 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
ARL1P40616 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.67■□□□□ 0.9
ARL1P40616 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
ARL1P40616 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.67■□□□□ 0.9
ARL1P40616 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARL1P40616 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARL1P40616 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
ARL1P40616 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ARL1P40616 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARL1P40616 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.67■□□□□ 0.9
ARL1P40616 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.67■□□□□ 0.9
ARL1P40616 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.67■□□□□ 0.9
ARL1P40616 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.67■□□□□ 0.9
ARL1P40616 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
ARL1P40616 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.67■□□□□ 0.9
ARL1P40616 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.67■□□□□ 0.9
ARL1P40616 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ARL1P40616 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ARL1P40616 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
ARL1P40616 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARL1P40616 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARL1P40616 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARL1P40616 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.67■□□□□ 0.9
ARL1P40616 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARL1P40616 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARL1P40616 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ARL1P40616 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARL1P40616 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARL1P40616 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ARL1P40616 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ARL1P40616 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARL1P40616 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARL1P40616 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARL1P40616 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.66■□□□□ 0.9
ARL1P40616 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ARL1P40616 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.66■□□□□ 0.9
ARL1P40616 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.66■□□□□ 0.9
ARL1P40616 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ARL1P40616 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARL1P40616 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARL1P40616 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ARL1P40616 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ARL1P40616 FEM1AP4-201ENST00000443167 1987 ntBASIC20.65■□□□□ 0.9
ARL1P40616 AC003102.1-202ENST00000563394 1796 ntBASIC20.65■□□□□ 0.9
ARL1P40616 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
ARL1P40616 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.65■□□□□ 0.9
ARL1P40616 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.65■□□□□ 0.9
ARL1P40616 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms