Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC26.85■■□□□ 1.89
COL15A1P39059 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
COL15A1P39059 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
COL15A1P39059 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC26.84■■□□□ 1.89
COL15A1P39059 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
COL15A1P39059 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
COL15A1P39059 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
COL15A1P39059 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
COL15A1P39059 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
COL15A1P39059 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC26.84■■□□□ 1.89
COL15A1P39059 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC26.84■■□□□ 1.89
COL15A1P39059 MMAB-206ENST00000540016 945 ntTSL 3 BASIC26.84■■□□□ 1.89
COL15A1P39059 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC26.84■■□□□ 1.89
COL15A1P39059 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC26.84■■□□□ 1.89
COL15A1P39059 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC26.84■■□□□ 1.89
COL15A1P39059 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC26.84■■□□□ 1.89
COL15A1P39059 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC26.84■■□□□ 1.89
COL15A1P39059 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC26.84■■□□□ 1.89
COL15A1P39059 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
COL15A1P39059 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
COL15A1P39059 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC26.83■■□□□ 1.89
COL15A1P39059 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
COL15A1P39059 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
COL15A1P39059 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
COL15A1P39059 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
COL15A1P39059 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
COL15A1P39059 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
COL15A1P39059 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
COL15A1P39059 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
COL15A1P39059 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
COL15A1P39059 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
COL15A1P39059 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
COL15A1P39059 OR2A1-AS1-201ENST00000462305 773 ntBASIC26.83■■□□□ 1.88
COL15A1P39059 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC26.83■■□□□ 1.88
COL15A1P39059 PBX1-209ENST00000485769 834 ntTSL 2 BASIC26.83■■□□□ 1.88
COL15A1P39059 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
COL15A1P39059 CD44-222ENST00000526025 1052 ntTSL 2 BASIC26.83■■□□□ 1.88
COL15A1P39059 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.88
COL15A1P39059 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC26.83■■□□□ 1.88
COL15A1P39059 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.88
COL15A1P39059 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
COL15A1P39059 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC26.82■■□□□ 1.88
COL15A1P39059 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC26.82■■□□□ 1.88
COL15A1P39059 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
COL15A1P39059 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
COL15A1P39059 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
COL15A1P39059 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
COL15A1P39059 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
COL15A1P39059 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
COL15A1P39059 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC26.82■■□□□ 1.88
COL15A1P39059 SERPINH1P1-201ENST00000419794 1249 ntBASIC26.82■■□□□ 1.88
COL15A1P39059 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC26.82■■□□□ 1.88
COL15A1P39059 AC128676.1-201ENST00000454392 318 ntBASIC26.82■■□□□ 1.88
COL15A1P39059 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC26.82■■□□□ 1.88
COL15A1P39059 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC26.82■■□□□ 1.88
COL15A1P39059 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
COL15A1P39059 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
COL15A1P39059 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
COL15A1P39059 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
COL15A1P39059 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
COL15A1P39059 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
COL15A1P39059 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
COL15A1P39059 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
COL15A1P39059 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
COL15A1P39059 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC26.81■■□□□ 1.88
COL15A1P39059 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC26.81■■□□□ 1.88
COL15A1P39059 UNC93B5-201ENST00000530315 699 ntBASIC26.81■■□□□ 1.88
COL15A1P39059 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC26.81■■□□□ 1.88
COL15A1P39059 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC26.81■■□□□ 1.88
COL15A1P39059 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
COL15A1P39059 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC26.8■■□□□ 1.88
COL15A1P39059 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC26.8■■□□□ 1.88
COL15A1P39059 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC26.8■■□□□ 1.88
COL15A1P39059 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
COL15A1P39059 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
COL15A1P39059 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC26.8■■□□□ 1.88
COL15A1P39059 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
COL15A1P39059 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
COL15A1P39059 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
COL15A1P39059 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
COL15A1P39059 AC080038.3-201ENST00000623346 1952 ntBASIC26.79■■□□□ 1.88
COL15A1P39059 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC26.79■■□□□ 1.88
COL15A1P39059 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
COL15A1P39059 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
COL15A1P39059 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
COL15A1P39059 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC26.79■■□□□ 1.88
COL15A1P39059 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
COL15A1P39059 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC26.79■■□□□ 1.88
COL15A1P39059 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC26.79■■□□□ 1.88
COL15A1P39059 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
COL15A1P39059 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
COL15A1P39059 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
COL15A1P39059 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
COL15A1P39059 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
COL15A1P39059 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC26.78■■□□□ 1.88
COL15A1P39059 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC26.78■■□□□ 1.88
COL15A1P39059 AL158047.1-201ENST00000445918 881 ntBASIC26.78■■□□□ 1.88
COL15A1P39059 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC26.78■■□□□ 1.88
COL15A1P39059 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC26.78■■□□□ 1.88
COL15A1P39059 MMD2-204ENST00000612910 778 ntTSL 5 BASIC26.78■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms