Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CKS2P33552 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CKS2P33552 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CKS2P33552 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CKS2P33552 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC15.44■□□□□ 0.06
CKS2P33552 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC15.44■□□□□ 0.06
CKS2P33552 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC15.44■□□□□ 0.06
CKS2P33552 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CKS2P33552 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC15.44■□□□□ 0.06
CKS2P33552 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC15.44■□□□□ 0.06
CKS2P33552 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CKS2P33552 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CKS2P33552 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CKS2P33552 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CKS2P33552 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CKS2P33552 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CKS2P33552 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CKS2P33552 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CKS2P33552 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CKS2P33552 PARN-205ENST00000539279 1557 ntTSL 2 BASIC15.43■□□□□ 0.06
CKS2P33552 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CKS2P33552 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC15.43■□□□□ 0.06
CKS2P33552 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
CKS2P33552 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CKS2P33552 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CKS2P33552 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC15.43■□□□□ 0.06
CKS2P33552 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CKS2P33552 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
CKS2P33552 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
CKS2P33552 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CKS2P33552 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.42■□□□□ 0.06
CKS2P33552 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC15.42■□□□□ 0.06
CKS2P33552 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CKS2P33552 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CKS2P33552 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CKS2P33552 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CKS2P33552 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CKS2P33552 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CKS2P33552 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC15.42■□□□□ 0.06
CKS2P33552 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CKS2P33552 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC15.42■□□□□ 0.06
CKS2P33552 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC15.42■□□□□ 0.06
CKS2P33552 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CKS2P33552 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CKS2P33552 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CKS2P33552 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CKS2P33552 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CKS2P33552 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC15.42■□□□□ 0.06
CKS2P33552 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC15.42■□□□□ 0.06
CKS2P33552 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CKS2P33552 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CKS2P33552 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CKS2P33552 AP005212.1-201ENST00000581547 1997 ntBASIC15.42■□□□□ 0.06
CKS2P33552 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC15.42■□□□□ 0.06
CKS2P33552 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CKS2P33552 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15.41■□□□□ 0.06
CKS2P33552 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CKS2P33552 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
CKS2P33552 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CKS2P33552 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CKS2P33552 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CKS2P33552 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CKS2P33552 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC15.41■□□□□ 0.06
CKS2P33552 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC15.41■□□□□ 0.06
CKS2P33552 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC15.41■□□□□ 0.06
CKS2P33552 BHLHE23-202ENST00000612929 1109 ntBASIC15.41■□□□□ 0.06
CKS2P33552 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
CKS2P33552 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CKS2P33552 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC15.41■□□□□ 0.06
CKS2P33552 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CKS2P33552 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CKS2P33552 OR7E47P-201ENST00000546390 1422 ntBASIC15.41■□□□□ 0.06
CKS2P33552 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
CKS2P33552 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC15.41■□□□□ 0.06
CKS2P33552 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CKS2P33552 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CKS2P33552 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CKS2P33552 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC15.41■□□□□ 0.06
CKS2P33552 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CKS2P33552 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
CKS2P33552 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CKS2P33552 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CKS2P33552 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CKS2P33552 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
CKS2P33552 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC15.4■□□□□ 0.06
CKS2P33552 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CKS2P33552 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC15.4■□□□□ 0.06
CKS2P33552 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CKS2P33552 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.4■□□□□ 0.06
CKS2P33552 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC15.4■□□□□ 0.06
CKS2P33552 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC15.4■□□□□ 0.06
CKS2P33552 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC15.4■□□□□ 0.06
CKS2P33552 AC079089.2-201ENST00000531211 1277 ntBASIC15.4■□□□□ 0.06
CKS2P33552 AFG3L1P-217ENST00000557444 2447 ntBASIC15.4■□□□□ 0.06
CKS2P33552 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC15.4■□□□□ 0.06
CKS2P33552 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC15.4■□□□□ 0.06
CKS2P33552 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CKS2P33552 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CKS2P33552 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC15.4■□□□□ 0.06
CKS2P33552 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms