Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 LAP3YNL239W 1365 nt4.38□□□□□ -1.71
PUB1P32588 SPE1YKL184W 1401 nt4.38□□□□□ -1.71 RIP-Chip
PUB1P32588 TRE1YPL176C 2352 nt4.38□□□□□ -1.71
PUB1P32588 CDC6YJL194W 1542 nt4.37□□□□□ -1.71
PUB1P32588 YBP2YGL060W 1926 nt4.37□□□□□ -1.71
PUB1P32588 RPS14AYCR031C 414 nt4.37□□□□□ -1.71
PUB1P32588 ECO1YFR027W 846 nt4.37□□□□□ -1.71
PUB1P32588 COX4YGL187C 468 nt4.37□□□□□ -1.71 RIP-Chip
PUB1P32588 YGL188C-AYGL188C-A 141 nt4.37□□□□□ -1.71
PUB1P32588 MRPL38YKL170W 417 nt4.37□□□□□ -1.71
PUB1P32588 PAI3YMR174C 207 nt4.37□□□□□ -1.71
PUB1P32588 ACS2YLR153C 2052 nt4.37□□□□□ -1.71 RIP-Chip
PUB1P32588 RAD53YPL153C 2466 nt4.37□□□□□ -1.71
PUB1P32588 PGM2YMR105C 1710 nt4.37□□□□□ -1.71
PUB1P32588 BUD14YAR014C 2130 nt4.37□□□□□ -1.71
PUB1P32588 TSL1YML100W 3297 nt4.36□□□□□ -1.71 RIP-Chip
PUB1P32588 SPC97YHR172W 2472 nt4.36□□□□□ -1.71
PUB1P32588 MPS3YJL019W 2049 nt4.36□□□□□ -1.71
PUB1P32588 MCX1YBR227C 1563 nt4.36□□□□□ -1.71
PUB1P32588 SKG3YLR187W 3081 nt4.36□□□□□ -1.71
PUB1P32588 FRS1YLR060W 1788 nt4.36□□□□□ -1.71
PUB1P32588 YDR134CYDR134C 411 nt4.36□□□□□ -1.71 RIP-Chip
PUB1P32588 RPP0YLR340W 939 nt4.36□□□□□ -1.71
PUB1P32588 RPL19BYBL027W 570 nt4.36□□□□□ -1.71
PUB1P32588 YNR042WYNR042W 429 nt4.36□□□□□ -1.71
PUB1P32588 RPS10AYOR293W 318 nt4.36□□□□□ -1.71
PUB1P32588 YVC1YOR087W 2028 nt4.36□□□□□ -1.71
PUB1P32588 NUG1YER006W 1563 nt4.36□□□□□ -1.71
PUB1P32588 NDT80YHR124W 1884 nt4.35□□□□□ -1.71
PUB1P32588 CLF1YLR117C 2064 nt4.35□□□□□ -1.71
PUB1P32588 ATP5YDR298C 639 nt4.35□□□□□ -1.71 RIP-Chip
PUB1P32588 SHE2YKL130C 741 nt4.35□□□□□ -1.71
PUB1P32588 ZEO1YOL109W 342 nt4.35□□□□□ -1.71 RIP-Chip
PUB1P32588 YOL114CYOL114C 609 nt4.35□□□□□ -1.71
PUB1P32588 DIT2YDR402C 1470 nt4.35□□□□□ -1.71
PUB1P32588 YMR221CYMR221C 1515 nt4.35□□□□□ -1.71 RIP-Chip
PUB1P32588 KAR2YJL034W 2049 nt4.34□□□□□ -1.71
PUB1P32588 RIM4YHL024W 2142 nt4.34□□□□□ -1.71
PUB1P32588 RPS11AYDR025W 471 nt4.34□□□□□ -1.71
PUB1P32588 YEL045CYEL045C 426 nt4.34□□□□□ -1.71 RIP-Chip
PUB1P32588 PMI40YER003C 1290 nt4.34□□□□□ -1.71 RIP-Chip
PUB1P32588 PKR1YMR123W 369 nt4.34□□□□□ -1.71 RIP-Chip
PUB1P32588 snR48snR48 113 nt4.34□□□□□ -1.71
PUB1P32588 AGA1YNR044W 2178 nt4.34□□□□□ -1.72 RIP-Chip
PUB1P32588 CYK3YDL117W 2658 nt4.34□□□□□ -1.72
PUB1P32588 SSA2YLL024C 1920 nt4.33□□□□□ -1.72
PUB1P32588 MIH1YMR036C 1665 nt4.33□□□□□ -1.72
PUB1P32588 YJR003CYJR003C 1560 nt4.33□□□□□ -1.72 RIP-Chip
PUB1P32588 UBX5YDR330W 1503 nt4.33□□□□□ -1.72
PUB1P32588 RRN11YML043C 1524 nt4.33□□□□□ -1.72
PUB1P32588 RBA50YDR527W 1320 nt4.33□□□□□ -1.72
PUB1P32588 SDH6YDR379C-A 240 nt4.33□□□□□ -1.72 RIP-Chip
PUB1P32588 YOS1YER074W-A 258 nt4.33□□□□□ -1.72
PUB1P32588 VOA1YGR106C 798 nt4.33□□□□□ -1.72
PUB1P32588 PIR1YKL164C 1026 nt4.33□□□□□ -1.72 RIP-Chip
PUB1P32588 YLR302CYLR302C 363 nt4.33□□□□□ -1.72
PUB1P32588 HEM4YOR278W 828 nt4.33□□□□□ -1.72
PUB1P32588 SIF2YBR103W 1608 nt4.32□□□□□ -1.72
PUB1P32588 LST4YKL176C 2487 nt4.32□□□□□ -1.72 RIP-Chip
PUB1P32588 PAC1YOR269W 1485 nt4.32□□□□□ -1.72
PUB1P32588 snR59snR59 78 nt4.32□□□□□ -1.72
PUB1P32588 YDL094CYDL094C 510 nt4.32□□□□□ -1.72
PUB1P32588 VPS29YHR012W 849 nt4.32□□□□□ -1.72
PUB1P32588 PAM16YJL104W 450 nt4.32□□□□□ -1.72
PUB1P32588 FCF2YLR051C 654 nt4.32□□□□□ -1.72
PUB1P32588 BUD28YLR062C 378 nt4.32□□□□□ -1.72
PUB1P32588 UBC7YMR022W 498 nt4.32□□□□□ -1.72
PUB1P32588 YOR192C-CYOR192C-C 237 nt4.32□□□□□ -1.72
PUB1P32588 ENV9YOR246C 993 nt4.32□□□□□ -1.72
PUB1P32588 YAR1YPL239W 603 nt4.32□□□□□ -1.72
PUB1P32588 PIN3YPR154W 648 nt4.32□□□□□ -1.72 RIP-Chip
PUB1P32588 SHG1YBR258C 429 nt4.32□□□□□ -1.72
PUB1P32588 FUS2YMR232W 2034 nt4.32□□□□□ -1.72
PUB1P32588 PEX29YDR479C 1665 nt4.32□□□□□ -1.72
PUB1P32588 MUB1YMR100W 1863 nt4.31□□□□□ -1.72 RIP-Chip
PUB1P32588 YCR075W-AYCR075W-A 228 nt4.31□□□□□ -1.72
PUB1P32588 RPS16BYDL083C 432 nt4.31□□□□□ -1.72 RIP-Chip
PUB1P32588 HOM2YDR158W 1098 nt4.31□□□□□ -1.72
PUB1P32588 YER067C-AYER067C-A 324 nt4.31□□□□□ -1.72
PUB1P32588 MPP10YJR002W 1782 nt4.31□□□□□ -1.72
PUB1P32588 SEC2YNL272C 2280 nt4.31□□□□□ -1.72
PUB1P32588 ADE6YGR061C 4077 nt4.31□□□□□ -1.72 RIP-Chip
PUB1P32588 YOR365CYOR365C 2112 nt4.31□□□□□ -1.72
PUB1P32588 MET7YOR241W 1647 nt4.31□□□□□ -1.72
PUB1P32588 STP1YDR463W 1560 nt4.31□□□□□ -1.72
PUB1P32588 SEC59YMR013C 1560 nt4.31□□□□□ -1.72 RIP-Chip
PUB1P32588 YHR182WYHR182W 2358 nt4.31□□□□□ -1.72
PUB1P32588 NCS2YNL119W 1482 nt4.3□□□□□ -1.72 RIP-Chip
PUB1P32588 YAL044W-AYAL044W-A 333 nt4.3□□□□□ -1.72 RIP-Chip
PUB1P32588 VPS63YLR261C 327 nt4.3□□□□□ -1.72
PUB1P32588 YMR013C-AYMR013C-A 150 nt4.3□□□□□ -1.72
PUB1P32588 CAB3YKL088W 1716 nt4.29□□□□□ -1.72
PUB1P32588 ARG4YHR018C 1392 nt4.29□□□□□ -1.72
PUB1P32588 YTA6YPL074W 2265 nt4.29□□□□□ -1.72
PUB1P32588 RRI2YOL117W 1938 nt4.29□□□□□ -1.72
PUB1P32588 STP2YHR006W 1626 nt4.29□□□□□ -1.72
PUB1P32588 YEH2YLR020C 1617 nt4.29□□□□□ -1.72
PUB1P32588 YDL068WYDL068W 330 nt4.29□□□□□ -1.72
PUB1P32588 YDR183C-AYDR183C-A 258 nt4.29□□□□□ -1.72
PUB1P32588 YDR274CYDR274C 372 nt4.29□□□□□ -1.72
Retrieved 100 of 7,029 protein–RNA pairs in 17.4 ms