Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCD3P28288 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ABCD3P28288 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ABCD3P28288 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCD3P28288 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ABCD3P28288 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCD3P28288 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCD3P28288 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ABCD3P28288 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.4■□□□□ 0.7
ABCD3P28288 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.4■□□□□ 0.7
ABCD3P28288 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCD3P28288 KRT18P20-201ENST00000548986 1279 ntBASIC19.4■□□□□ 0.7
ABCD3P28288 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.4■□□□□ 0.7
ABCD3P28288 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCD3P28288 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCD3P28288 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ABCD3P28288 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCD3P28288 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.4■□□□□ 0.7
ABCD3P28288 AC061975.6-201ENST00000579045 1553 ntBASIC19.4■□□□□ 0.7
ABCD3P28288 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCD3P28288 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
ABCD3P28288 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
ABCD3P28288 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
ABCD3P28288 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ABCD3P28288 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
ABCD3P28288 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.39■□□□□ 0.69
ABCD3P28288 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ABCD3P28288 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ABCD3P28288 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ABCD3P28288 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.39■□□□□ 0.69
ABCD3P28288 AC006015.1-201ENST00000429970 570 ntBASIC19.39■□□□□ 0.69
ABCD3P28288 UBE2DNL-204ENST00000602536 740 ntBASIC19.39■□□□□ 0.69
ABCD3P28288 IKBKGP1-201ENST00000612193 1073 ntBASIC19.39■□□□□ 0.69
ABCD3P28288 AC092666.2-201ENST00000613287 246 ntBASIC19.39■□□□□ 0.69
ABCD3P28288 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ABCD3P28288 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.39■□□□□ 0.69
ABCD3P28288 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ABCD3P28288 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ABCD3P28288 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ABCD3P28288 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.39■□□□□ 0.69
ABCD3P28288 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ABCD3P28288 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ABCD3P28288 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.38■□□□□ 0.69
ABCD3P28288 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.38■□□□□ 0.69
ABCD3P28288 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ABCD3P28288 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.38■□□□□ 0.69
ABCD3P28288 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ABCD3P28288 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.38■□□□□ 0.69
ABCD3P28288 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.38■□□□□ 0.69
ABCD3P28288 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.38■□□□□ 0.69
ABCD3P28288 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ABCD3P28288 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCD3P28288 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.37■□□□□ 0.69
ABCD3P28288 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCD3P28288 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCD3P28288 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
ABCD3P28288 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ABCD3P28288 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCD3P28288 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCD3P28288 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ABCD3P28288 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCD3P28288 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCD3P28288 KRT18P11-201ENST00000435214 1283 ntBASIC19.37■□□□□ 0.69
ABCD3P28288 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.37■□□□□ 0.69
ABCD3P28288 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.37■□□□□ 0.69
ABCD3P28288 SLC7A5P2-201ENST00000553010 536 ntBASIC19.37■□□□□ 0.69
ABCD3P28288 AC120498.10-201ENST00000621827 505 ntBASIC19.37■□□□□ 0.69
ABCD3P28288 AC092437.1-201ENST00000624794 1048 ntBASIC19.37■□□□□ 0.69
ABCD3P28288 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.37■□□□□ 0.69
ABCD3P28288 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCD3P28288 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCD3P28288 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCD3P28288 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.37■□□□□ 0.69
ABCD3P28288 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCD3P28288 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.36■□□□□ 0.69
ABCD3P28288 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
ABCD3P28288 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ABCD3P28288 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
ABCD3P28288 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
ABCD3P28288 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.36■□□□□ 0.69
ABCD3P28288 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
ABCD3P28288 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ABCD3P28288 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ABCD3P28288 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ABCD3P28288 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ABCD3P28288 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ABCD3P28288 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
ABCD3P28288 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.36■□□□□ 0.69
ABCD3P28288 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ABCD3P28288 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
ABCD3P28288 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ABCD3P28288 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ABCD3P28288 Z98882.1-201ENST00000622160 2253 ntBASIC19.35■□□□□ 0.69
ABCD3P28288 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ABCD3P28288 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ABCD3P28288 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ABCD3P28288 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.35■□□□□ 0.69
ABCD3P28288 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ABCD3P28288 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.35■□□□□ 0.69
ABCD3P28288 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms