Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMO1P25800 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMO1P25800 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMO1P25800 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMO1P25800 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMO1P25800 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMO1P25800 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LMO1P25800 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.67■□□□□ 0.42
LMO1P25800 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMO1P25800 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LMO1P25800 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.67■□□□□ 0.42
LMO1P25800 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.67■□□□□ 0.42
LMO1P25800 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.67■□□□□ 0.42
LMO1P25800 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LMO1P25800 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.67■□□□□ 0.42
LMO1P25800 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMO1P25800 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.67■□□□□ 0.42
LMO1P25800 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LMO1P25800 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMO1P25800 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.67■□□□□ 0.42
LMO1P25800 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LMO1P25800 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.66■□□□□ 0.42
LMO1P25800 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LMO1P25800 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LMO1P25800 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.66■□□□□ 0.42
LMO1P25800 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
LMO1P25800 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LMO1P25800 IRS3P-201ENST00000223076 1006 ntBASIC17.66■□□□□ 0.42
LMO1P25800 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LMO1P25800 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.66■□□□□ 0.42
LMO1P25800 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.66■□□□□ 0.42
LMO1P25800 TPRG1LP1-201ENST00000598702 760 ntBASIC17.66■□□□□ 0.42
LMO1P25800 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LMO1P25800 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LMO1P25800 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LMO1P25800 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.66■□□□□ 0.42
LMO1P25800 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LMO1P25800 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
LMO1P25800 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LMO1P25800 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LMO1P25800 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LMO1P25800 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LMO1P25800 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LMO1P25800 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LMO1P25800 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.65■□□□□ 0.42
LMO1P25800 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.65■□□□□ 0.42
LMO1P25800 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.65■□□□□ 0.42
LMO1P25800 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LMO1P25800 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LMO1P25800 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.65■□□□□ 0.42
LMO1P25800 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LMO1P25800 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.65■□□□□ 0.42
LMO1P25800 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
LMO1P25800 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.42
LMO1P25800 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.64■□□□□ 0.41
LMO1P25800 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LMO1P25800 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.64■□□□□ 0.41
LMO1P25800 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
LMO1P25800 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LMO1P25800 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LMO1P25800 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
LMO1P25800 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.64■□□□□ 0.41
LMO1P25800 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.64■□□□□ 0.41
LMO1P25800 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LMO1P25800 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.64■□□□□ 0.41
LMO1P25800 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC17.64■□□□□ 0.41
LMO1P25800 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LMO1P25800 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LMO1P25800 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
LMO1P25800 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.64■□□□□ 0.41
LMO1P25800 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.64■□□□□ 0.41
LMO1P25800 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LMO1P25800 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.63■□□□□ 0.41
LMO1P25800 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMO1P25800 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMO1P25800 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.63■□□□□ 0.41
LMO1P25800 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.63■□□□□ 0.41
LMO1P25800 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.63■□□□□ 0.41
LMO1P25800 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.63■□□□□ 0.41
LMO1P25800 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.63■□□□□ 0.41
LMO1P25800 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.63■□□□□ 0.41
LMO1P25800 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMO1P25800 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMO1P25800 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMO1P25800 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LMO1P25800 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.63■□□□□ 0.41
LMO1P25800 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMO1P25800 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.63■□□□□ 0.41
LMO1P25800 AL049796.1-201ENST00000565336 1766 ntBASIC17.63■□□□□ 0.41
LMO1P25800 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
LMO1P25800 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.63■□□□□ 0.41
LMO1P25800 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMO1P25800 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMO1P25800 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.62■□□□□ 0.41
LMO1P25800 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.62■□□□□ 0.41
LMO1P25800 AF106564.1-201ENST00000607058 2553 ntBASIC17.62■□□□□ 0.41
LMO1P25800 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LMO1P25800 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
LMO1P25800 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.62■□□□□ 0.41
LMO1P25800 AC105265.2-201ENST00000467189 838 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms