Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
XPAP23025 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.2■□□□□ 0.98
XPAP23025 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.2■□□□□ 0.98
XPAP23025 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.2■□□□□ 0.98
XPAP23025 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
XPAP23025 AIRN-201ENST00000601203 4374 ntBASIC21.19■□□□□ 0.98
XPAP23025 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.19■□□□□ 0.98
XPAP23025 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
XPAP23025 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
XPAP23025 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
XPAP23025 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
XPAP23025 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
XPAP23025 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.19■□□□□ 0.98
XPAP23025 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.19■□□□□ 0.98
XPAP23025 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
XPAP23025 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
XPAP23025 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.19■□□□□ 0.98
XPAP23025 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
XPAP23025 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.19■□□□□ 0.98
XPAP23025 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
XPAP23025 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
XPAP23025 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.19■□□□□ 0.98
XPAP23025 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
XPAP23025 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.18■□□□□ 0.98
XPAP23025 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
XPAP23025 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
XPAP23025 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.18■□□□□ 0.98
XPAP23025 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
XPAP23025 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.18■□□□□ 0.98
XPAP23025 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.18■□□□□ 0.98
XPAP23025 SLC7A5P2-201ENST00000553010 536 ntBASIC21.18■□□□□ 0.98
XPAP23025 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.18■□□□□ 0.98
XPAP23025 MFSD11-216ENST00000590393 1141 ntBASIC21.18■□□□□ 0.98
XPAP23025 AC073111.5-205ENST00000641717 521 ntBASIC21.18■□□□□ 0.98
XPAP23025 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
XPAP23025 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
XPAP23025 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
XPAP23025 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
XPAP23025 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
XPAP23025 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
XPAP23025 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
XPAP23025 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
XPAP23025 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
XPAP23025 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.17■□□□□ 0.98
XPAP23025 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.17■□□□□ 0.98
XPAP23025 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.17■□□□□ 0.98
XPAP23025 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.17■□□□□ 0.98
XPAP23025 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
XPAP23025 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.17■□□□□ 0.98
XPAP23025 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.17■□□□□ 0.98
XPAP23025 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
XPAP23025 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
XPAP23025 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
XPAP23025 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
XPAP23025 C11orf96-202ENST00000528572 1834 ntBASIC21.17■□□□□ 0.98
XPAP23025 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
XPAP23025 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
XPAP23025 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
XPAP23025 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
XPAP23025 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.16■□□□□ 0.98
XPAP23025 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.16■□□□□ 0.98
XPAP23025 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
XPAP23025 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
XPAP23025 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
XPAP23025 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
XPAP23025 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
XPAP23025 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
XPAP23025 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
XPAP23025 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
XPAP23025 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
XPAP23025 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
XPAP23025 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
XPAP23025 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.16■□□□□ 0.98
XPAP23025 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
XPAP23025 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
XPAP23025 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
XPAP23025 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
XPAP23025 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
XPAP23025 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
XPAP23025 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
XPAP23025 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
XPAP23025 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
XPAP23025 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
XPAP23025 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.15■□□□□ 0.98
XPAP23025 AC026185.1-201ENST00000445748 174 ntBASIC21.15■□□□□ 0.98
XPAP23025 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
XPAP23025 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.15■□□□□ 0.98
XPAP23025 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
XPAP23025 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.15■□□□□ 0.98
XPAP23025 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.15■□□□□ 0.98
XPAP23025 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
XPAP23025 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.15■□□□□ 0.98
XPAP23025 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
XPAP23025 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
XPAP23025 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
XPAP23025 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.15■□□□□ 0.98
XPAP23025 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
XPAP23025 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
XPAP23025 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
XPAP23025 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms