Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
MMP8P22894 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
MMP8P22894 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
MMP8P22894 AC061975.6-201ENST00000579045 1553 ntBASIC22.14■■□□□ 1.13
MMP8P22894 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.14■■□□□ 1.13
MMP8P22894 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.14■■□□□ 1.13
MMP8P22894 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
MMP8P22894 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
MMP8P22894 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
MMP8P22894 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
MMP8P22894 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
MMP8P22894 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.14■■□□□ 1.13
MMP8P22894 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.14■■□□□ 1.13
MMP8P22894 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.14■■□□□ 1.13
MMP8P22894 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
MMP8P22894 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.14■■□□□ 1.13
MMP8P22894 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
MMP8P22894 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
MMP8P22894 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
MMP8P22894 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
MMP8P22894 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
MMP8P22894 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
MMP8P22894 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
MMP8P22894 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
MMP8P22894 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
MMP8P22894 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.13■■□□□ 1.13
MMP8P22894 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.13■■□□□ 1.13
MMP8P22894 AC138907.5-202ENST00000569484 235 ntBASIC22.13■■□□□ 1.13
MMP8P22894 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.13■■□□□ 1.13
MMP8P22894 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
MMP8P22894 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
MMP8P22894 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
MMP8P22894 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
MMP8P22894 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
MMP8P22894 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC22.12■■□□□ 1.13
MMP8P22894 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
MMP8P22894 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
MMP8P22894 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.12■■□□□ 1.13
MMP8P22894 KRT18P14-201ENST00000534205 1250 ntBASIC22.12■■□□□ 1.13
MMP8P22894 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
MMP8P22894 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
MMP8P22894 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
MMP8P22894 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.12■■□□□ 1.13
MMP8P22894 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
MMP8P22894 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
MMP8P22894 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.11■■□□□ 1.13
MMP8P22894 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
MMP8P22894 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC22.11■■□□□ 1.13
MMP8P22894 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC22.11■■□□□ 1.13
MMP8P22894 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
MMP8P22894 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
MMP8P22894 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.11■■□□□ 1.13
MMP8P22894 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.11■■□□□ 1.13
MMP8P22894 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.11■■□□□ 1.13
MMP8P22894 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
MMP8P22894 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
MMP8P22894 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
MMP8P22894 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.11■■□□□ 1.13
MMP8P22894 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
MMP8P22894 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
MMP8P22894 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MMP8P22894 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MMP8P22894 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MMP8P22894 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
MMP8P22894 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MMP8P22894 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
MMP8P22894 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MMP8P22894 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
MMP8P22894 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.1■■□□□ 1.13
MMP8P22894 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC22.1■■□□□ 1.13
MMP8P22894 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
MMP8P22894 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.09■■□□□ 1.13
MMP8P22894 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
MMP8P22894 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.09■■□□□ 1.13
MMP8P22894 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
MMP8P22894 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
MMP8P22894 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.09■■□□□ 1.13
MMP8P22894 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.09■■□□□ 1.13
MMP8P22894 POU5F1P4-201ENST00000413175 1085 ntBASIC22.09■■□□□ 1.13
MMP8P22894 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.09■■□□□ 1.13
MMP8P22894 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.09■■□□□ 1.13
MMP8P22894 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.09■■□□□ 1.13
MMP8P22894 AC104187.1-201ENST00000607510 612 ntBASIC22.09■■□□□ 1.13
MMP8P22894 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
MMP8P22894 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
MMP8P22894 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
MMP8P22894 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
MMP8P22894 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
MMP8P22894 AP004607.4-201ENST00000530158 1459 ntBASIC22.09■■□□□ 1.13
MMP8P22894 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
MMP8P22894 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
MMP8P22894 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
MMP8P22894 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22.08■■□□□ 1.13
MMP8P22894 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
MMP8P22894 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
MMP8P22894 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC22.08■■□□□ 1.13
MMP8P22894 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
MMP8P22894 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
MMP8P22894 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
MMP8P22894 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms