Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
HLA-DPA1P20036 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DPA1P20036 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DPA1P20036 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DPA1P20036 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DPA1P20036 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DPA1P20036 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DPA1P20036 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DPA1P20036 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DPA1P20036 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DPA1P20036 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
HLA-DPA1P20036 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DPA1P20036 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DPA1P20036 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DPA1P20036 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
HLA-DPA1P20036 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
HLA-DPA1P20036 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.21■□□□□ 0.99
HLA-DPA1P20036 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.21■□□□□ 0.99
HLA-DPA1P20036 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DPA1P20036 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DPA1P20036 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.21■□□□□ 0.99
HLA-DPA1P20036 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
HLA-DPA1P20036 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DPA1P20036 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.21■□□□□ 0.99
HLA-DPA1P20036 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
HLA-DPA1P20036 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DPA1P20036 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.21■□□□□ 0.99
HLA-DPA1P20036 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DPA1P20036 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DPA1P20036 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.21■□□□□ 0.99
HLA-DPA1P20036 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DPA1P20036 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DPA1P20036 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.21■□□□□ 0.99
HLA-DPA1P20036 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DPA1P20036 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DPA1P20036 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DPA1P20036 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DPA1P20036 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DPA1P20036 AC097381.1-201ENST00000429019 1296 ntBASIC21.2■□□□□ 0.98
HLA-DPA1P20036 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DPA1P20036 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.2■□□□□ 0.98
HLA-DPA1P20036 RARRES2P6-201ENST00000567333 442 ntBASIC21.2■□□□□ 0.98
HLA-DPA1P20036 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.2■□□□□ 0.98
HLA-DPA1P20036 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.2■□□□□ 0.98
HLA-DPA1P20036 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
HLA-DPA1P20036 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.2■□□□□ 0.98
HLA-DPA1P20036 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DPA1P20036 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DPA1P20036 FEM1AP4-201ENST00000443167 1987 ntBASIC21.19■□□□□ 0.98
HLA-DPA1P20036 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DPA1P20036 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DPA1P20036 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.19■□□□□ 0.98
HLA-DPA1P20036 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DPA1P20036 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.19■□□□□ 0.98
HLA-DPA1P20036 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DPA1P20036 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DPA1P20036 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.19■□□□□ 0.98
HLA-DPA1P20036 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.19■□□□□ 0.98
HLA-DPA1P20036 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.19■□□□□ 0.98
HLA-DPA1P20036 AC138907.5-202ENST00000569484 235 ntBASIC21.19■□□□□ 0.98
HLA-DPA1P20036 MIR6821-201ENST00000617625 74 ntBASIC21.19■□□□□ 0.98
HLA-DPA1P20036 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DPA1P20036 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-DPA1P20036 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-DPA1P20036 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-DPA1P20036 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
HLA-DPA1P20036 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.18■□□□□ 0.98
HLA-DPA1P20036 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.18■□□□□ 0.98
HLA-DPA1P20036 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.18■□□□□ 0.98
HLA-DPA1P20036 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.18■□□□□ 0.98
HLA-DPA1P20036 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
HLA-DPA1P20036 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.18■□□□□ 0.98
HLA-DPA1P20036 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-DPA1P20036 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-DPA1P20036 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-DPA1P20036 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.18■□□□□ 0.98
HLA-DPA1P20036 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-DPA1P20036 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-DPA1P20036 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-DPA1P20036 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-DPA1P20036 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-DPA1P20036 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-DPA1P20036 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-DPA1P20036 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.17■□□□□ 0.98
HLA-DPA1P20036 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-DPA1P20036 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.17■□□□□ 0.98
HLA-DPA1P20036 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.17■□□□□ 0.98
HLA-DPA1P20036 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.17■□□□□ 0.98
HLA-DPA1P20036 AC008175.2-201ENST00000612840 297 ntBASIC21.17■□□□□ 0.98
HLA-DPA1P20036 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
HLA-DPA1P20036 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-DPA1P20036 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-DPA1P20036 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.17■□□□□ 0.98
HLA-DPA1P20036 AL024507.2-201ENST00000606070 2574 ntBASIC21.16■□□□□ 0.98
HLA-DPA1P20036 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-DPA1P20036 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-DPA1P20036 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-DPA1P20036 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-DPA1P20036 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-DPA1P20036 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms