Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCK1P16333 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
NCK1P16333 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
NCK1P16333 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
NCK1P16333 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NCK1P16333 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
NCK1P16333 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCK1P16333 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.82■□□□□ 0.76
NCK1P16333 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCK1P16333 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCK1P16333 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCK1P16333 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCK1P16333 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCK1P16333 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCK1P16333 AC009299.2-201ENST00000482477 511 ntBASIC19.82■□□□□ 0.76
NCK1P16333 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
NCK1P16333 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCK1P16333 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.82■□□□□ 0.76
NCK1P16333 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
NCK1P16333 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCK1P16333 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCK1P16333 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
NCK1P16333 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NCK1P16333 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.82■□□□□ 0.76
NCK1P16333 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.82■□□□□ 0.76
NCK1P16333 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
NCK1P16333 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NCK1P16333 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NCK1P16333 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NCK1P16333 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NCK1P16333 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
NCK1P16333 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NCK1P16333 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.81■□□□□ 0.76
NCK1P16333 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.81■□□□□ 0.76
NCK1P16333 AL034346.1-201ENST00000568244 1277 ntBASIC19.81■□□□□ 0.76
NCK1P16333 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NCK1P16333 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
NCK1P16333 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NCK1P16333 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
NCK1P16333 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.81■□□□□ 0.76
NCK1P16333 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NCK1P16333 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NCK1P16333 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NCK1P16333 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.81■□□□□ 0.76
NCK1P16333 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.81■□□□□ 0.76
NCK1P16333 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NCK1P16333 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NCK1P16333 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NCK1P16333 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NCK1P16333 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NCK1P16333 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.8■□□□□ 0.76
NCK1P16333 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NCK1P16333 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
NCK1P16333 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
NCK1P16333 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
NCK1P16333 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.8■□□□□ 0.76
NCK1P16333 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.8■□□□□ 0.76
NCK1P16333 RARRES2P1-201ENST00000474487 481 ntBASIC19.8■□□□□ 0.76
NCK1P16333 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.8■□□□□ 0.76
NCK1P16333 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
NCK1P16333 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NCK1P16333 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.8■□□□□ 0.76
NCK1P16333 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NCK1P16333 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
NCK1P16333 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
NCK1P16333 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NCK1P16333 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.8■□□□□ 0.76
NCK1P16333 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.8■□□□□ 0.76
NCK1P16333 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.8■□□□□ 0.76
NCK1P16333 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NCK1P16333 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NCK1P16333 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NCK1P16333 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.79■□□□□ 0.76
NCK1P16333 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NCK1P16333 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NCK1P16333 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NCK1P16333 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NCK1P16333 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NCK1P16333 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NCK1P16333 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.79■□□□□ 0.76
NCK1P16333 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
NCK1P16333 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NCK1P16333 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NCK1P16333 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
NCK1P16333 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
NCK1P16333 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NCK1P16333 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.79■□□□□ 0.76
NCK1P16333 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.79■□□□□ 0.76
NCK1P16333 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NCK1P16333 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NCK1P16333 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NCK1P16333 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NCK1P16333 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.79■□□□□ 0.76
NCK1P16333 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
NCK1P16333 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
NCK1P16333 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCK1P16333 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCK1P16333 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCK1P16333 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
NCK1P16333 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms