Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBL4AP11441 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBL4AP11441 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBL4AP11441 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBL4AP11441 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBL4AP11441 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
UBL4AP11441 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
UBL4AP11441 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.39■□□□□ 0.7
UBL4AP11441 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
UBL4AP11441 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBL4AP11441 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
UBL4AP11441 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBL4AP11441 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBL4AP11441 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBL4AP11441 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UBL4AP11441 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
UBL4AP11441 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UBL4AP11441 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.39■□□□□ 0.69
UBL4AP11441 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.39■□□□□ 0.69
UBL4AP11441 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBL4AP11441 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UBL4AP11441 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UBL4AP11441 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBL4AP11441 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.39■□□□□ 0.69
UBL4AP11441 AC007375.3-201ENST00000600936 2314 ntBASIC19.39■□□□□ 0.69
UBL4AP11441 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBL4AP11441 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBL4AP11441 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBL4AP11441 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBL4AP11441 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UBL4AP11441 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UBL4AP11441 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBL4AP11441 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
UBL4AP11441 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UBL4AP11441 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBL4AP11441 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBL4AP11441 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.38■□□□□ 0.69
UBL4AP11441 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UBL4AP11441 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.38■□□□□ 0.69
UBL4AP11441 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.38■□□□□ 0.69
UBL4AP11441 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UBL4AP11441 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.38■□□□□ 0.69
UBL4AP11441 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.38■□□□□ 0.69
UBL4AP11441 LINC02228-203ENST00000641970 1355 ntBASIC19.38■□□□□ 0.69
UBL4AP11441 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
UBL4AP11441 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
UBL4AP11441 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UBL4AP11441 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBL4AP11441 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UBL4AP11441 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBL4AP11441 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBL4AP11441 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBL4AP11441 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.37■□□□□ 0.69
UBL4AP11441 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.37■□□□□ 0.69
UBL4AP11441 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.37■□□□□ 0.69
UBL4AP11441 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBL4AP11441 YBX1P1-201ENST00000445822 960 ntBASIC19.37■□□□□ 0.69
UBL4AP11441 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBL4AP11441 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBL4AP11441 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBL4AP11441 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBL4AP11441 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
UBL4AP11441 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBL4AP11441 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
UBL4AP11441 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UBL4AP11441 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UBL4AP11441 AC026310.3-201ENST00000625186 2373 ntBASIC19.36■□□□□ 0.69
UBL4AP11441 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
UBL4AP11441 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.36■□□□□ 0.69
UBL4AP11441 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
UBL4AP11441 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.36■□□□□ 0.69
UBL4AP11441 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
UBL4AP11441 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
UBL4AP11441 AC079140.4-201ENST00000507448 529 ntBASIC19.36■□□□□ 0.69
UBL4AP11441 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBL4AP11441 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.36■□□□□ 0.69
UBL4AP11441 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.36■□□□□ 0.69
UBL4AP11441 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.36■□□□□ 0.69
UBL4AP11441 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBL4AP11441 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.36■□□□□ 0.69
UBL4AP11441 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBL4AP11441 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.36■□□□□ 0.69
UBL4AP11441 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBL4AP11441 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
UBL4AP11441 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBL4AP11441 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
UBL4AP11441 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
UBL4AP11441 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBL4AP11441 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBL4AP11441 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBL4AP11441 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.35■□□□□ 0.69
UBL4AP11441 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBL4AP11441 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
UBL4AP11441 AC123595.1-201ENST00000440769 1046 ntBASIC19.35■□□□□ 0.69
UBL4AP11441 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.35■□□□□ 0.69
UBL4AP11441 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBL4AP11441 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.35■□□□□ 0.69
UBL4AP11441 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBL4AP11441 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.35■□□□□ 0.69
UBL4AP11441 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms