Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FREM3P0C091 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FREM3P0C091 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.13■□□□□ 0.65
FREM3P0C091 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.13■□□□□ 0.65
FREM3P0C091 AP001160.3-201ENST00000601484 763 ntBASIC19.13■□□□□ 0.65
FREM3P0C091 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.13■□□□□ 0.65
FREM3P0C091 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.13■□□□□ 0.65
FREM3P0C091 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
FREM3P0C091 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
FREM3P0C091 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FREM3P0C091 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
FREM3P0C091 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FREM3P0C091 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
FREM3P0C091 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FREM3P0C091 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.13■□□□□ 0.65
FREM3P0C091 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.13■□□□□ 0.65
FREM3P0C091 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
FREM3P0C091 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.13■□□□□ 0.65
FREM3P0C091 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FREM3P0C091 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
FREM3P0C091 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FREM3P0C091 AC026310.3-201ENST00000625186 2373 ntBASIC19.13■□□□□ 0.65
FREM3P0C091 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
FREM3P0C091 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FREM3P0C091 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FREM3P0C091 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FREM3P0C091 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FREM3P0C091 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.12■□□□□ 0.65
FREM3P0C091 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FREM3P0C091 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FREM3P0C091 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FREM3P0C091 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FREM3P0C091 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FREM3P0C091 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
FREM3P0C091 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
FREM3P0C091 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FREM3P0C091 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FREM3P0C091 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FREM3P0C091 AC013268.1-206ENST00000638368 961 ntBASIC19.12■□□□□ 0.65
FREM3P0C091 AC112229.1-201ENST00000639295 961 ntBASIC19.12■□□□□ 0.65
FREM3P0C091 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.11■□□□□ 0.65
FREM3P0C091 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FREM3P0C091 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
FREM3P0C091 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.11■□□□□ 0.65
FREM3P0C091 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FREM3P0C091 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.11■□□□□ 0.65
FREM3P0C091 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.11■□□□□ 0.65
FREM3P0C091 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.11■□□□□ 0.65
FREM3P0C091 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
FREM3P0C091 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
FREM3P0C091 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
FREM3P0C091 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.11■□□□□ 0.65
FREM3P0C091 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
FREM3P0C091 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.1■□□□□ 0.65
FREM3P0C091 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
FREM3P0C091 AC008175.2-201ENST00000612840 297 ntBASIC19.1■□□□□ 0.65
FREM3P0C091 AC231657.2-201ENST00000624556 255 ntBASIC19.1■□□□□ 0.65
FREM3P0C091 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FREM3P0C091 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
FREM3P0C091 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FREM3P0C091 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FREM3P0C091 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.1■□□□□ 0.65
FREM3P0C091 POU5F1P4-201ENST00000413175 1085 ntBASIC19.1■□□□□ 0.65
FREM3P0C091 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.1■□□□□ 0.65
FREM3P0C091 AC080038.1-201ENST00000611274 1154 ntBASIC19.1■□□□□ 0.65
FREM3P0C091 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FREM3P0C091 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FREM3P0C091 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
FREM3P0C091 KRT16P2-201ENST00000414673 1423 ntBASIC19.1■□□□□ 0.65
FREM3P0C091 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
FREM3P0C091 AC011767.1-201ENST00000617410 1153 ntBASIC19.09■□□□□ 0.65
FREM3P0C091 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FREM3P0C091 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.09■□□□□ 0.65
FREM3P0C091 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FREM3P0C091 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FREM3P0C091 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FREM3P0C091 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
FREM3P0C091 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
FREM3P0C091 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.09■□□□□ 0.65
FREM3P0C091 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.09■□□□□ 0.65
FREM3P0C091 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FREM3P0C091 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.09■□□□□ 0.65
FREM3P0C091 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
FREM3P0C091 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
FREM3P0C091 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
FREM3P0C091 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.08■□□□□ 0.65
FREM3P0C091 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
FREM3P0C091 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
FREM3P0C091 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
FREM3P0C091 AL137060.1-201ENST00000618151 2648 ntBASIC19.08■□□□□ 0.65
FREM3P0C091 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
FREM3P0C091 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
FREM3P0C091 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
FREM3P0C091 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
FREM3P0C091 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.08■□□□□ 0.64
FREM3P0C091 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.08■□□□□ 0.64
FREM3P0C091 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
FREM3P0C091 AC061975.6-201ENST00000579045 1553 ntBASIC19.08■□□□□ 0.64
FREM3P0C091 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
FREM3P0C091 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms