Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
HOXC6P09630 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
HOXC6P09630 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.9■■□□□ 1.42
HOXC6P09630 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
HOXC6P09630 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
HOXC6P09630 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
HOXC6P09630 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
HOXC6P09630 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
HOXC6P09630 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC23.9■■□□□ 1.42
HOXC6P09630 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
HOXC6P09630 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC23.9■■□□□ 1.42
HOXC6P09630 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
HOXC6P09630 AC100791.3-201ENST00000617619 330 ntBASIC23.9■■□□□ 1.42
HOXC6P09630 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
HOXC6P09630 AC139530.1-201ENST00000575312 1977 ntBASIC23.9■■□□□ 1.42
HOXC6P09630 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
HOXC6P09630 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
HOXC6P09630 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.89■■□□□ 1.42
HOXC6P09630 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
HOXC6P09630 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
HOXC6P09630 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.89■■□□□ 1.42
HOXC6P09630 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
HOXC6P09630 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC23.89■■□□□ 1.41
HOXC6P09630 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
HOXC6P09630 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
HOXC6P09630 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.41
HOXC6P09630 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC23.89■■□□□ 1.41
HOXC6P09630 GATS-209ENST00000454084 1030 ntTSL 3 BASIC23.89■■□□□ 1.41
HOXC6P09630 FAM21FP-204ENST00000608637 956 ntBASIC23.89■■□□□ 1.41
HOXC6P09630 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
HOXC6P09630 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
HOXC6P09630 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
HOXC6P09630 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
HOXC6P09630 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.88■■□□□ 1.41
HOXC6P09630 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC23.88■■□□□ 1.41
HOXC6P09630 CASP6-205ENST00000505486 538 ntTSL 4 BASIC23.88■■□□□ 1.41
HOXC6P09630 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.88■■□□□ 1.41
HOXC6P09630 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.88■■□□□ 1.41
HOXC6P09630 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
HOXC6P09630 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC23.87■■□□□ 1.41
HOXC6P09630 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
HOXC6P09630 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
HOXC6P09630 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
HOXC6P09630 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
HOXC6P09630 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
HOXC6P09630 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
HOXC6P09630 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
HOXC6P09630 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC23.87■■□□□ 1.41
HOXC6P09630 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC23.87■■□□□ 1.41
HOXC6P09630 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.87■■□□□ 1.41
HOXC6P09630 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
HOXC6P09630 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC23.87■■□□□ 1.41
HOXC6P09630 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC23.87■■□□□ 1.41
HOXC6P09630 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC23.87■■□□□ 1.41
HOXC6P09630 KRT17P1-201ENST00000399211 1546 ntBASIC23.87■■□□□ 1.41
HOXC6P09630 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
HOXC6P09630 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
HOXC6P09630 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
HOXC6P09630 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
HOXC6P09630 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HOXC6P09630 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HOXC6P09630 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.86■■□□□ 1.41
HOXC6P09630 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
HOXC6P09630 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HOXC6P09630 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
HOXC6P09630 AC091799.1-201ENST00000422823 811 ntBASIC23.86■■□□□ 1.41
HOXC6P09630 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
HOXC6P09630 UNC93B4-201ENST00000505679 747 ntBASIC23.86■■□□□ 1.41
HOXC6P09630 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC23.86■■□□□ 1.41
HOXC6P09630 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC23.86■■□□□ 1.41
HOXC6P09630 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
HOXC6P09630 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.86■■□□□ 1.41
HOXC6P09630 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HOXC6P09630 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
HOXC6P09630 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
HOXC6P09630 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
HOXC6P09630 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HOXC6P09630 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
HOXC6P09630 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
HOXC6P09630 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
HOXC6P09630 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
HOXC6P09630 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
HOXC6P09630 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
HOXC6P09630 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
HOXC6P09630 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
HOXC6P09630 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
HOXC6P09630 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
HOXC6P09630 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC23.85■■□□□ 1.41
HOXC6P09630 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC23.85■■□□□ 1.41
HOXC6P09630 NME6-213ENST00000451657 871 ntTSL 2 BASIC23.85■■□□□ 1.41
HOXC6P09630 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
HOXC6P09630 AC008403.3-201ENST00000598924 454 ntBASIC23.85■■□□□ 1.41
HOXC6P09630 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
HOXC6P09630 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
HOXC6P09630 AC003102.1-202ENST00000563394 1796 ntBASIC23.85■■□□□ 1.41
HOXC6P09630 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
HOXC6P09630 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
HOXC6P09630 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
HOXC6P09630 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
HOXC6P09630 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.84■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms