Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRGV3P03979 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRGV3P03979 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
TRGV3P03979 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRGV3P03979 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TRGV3P03979 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRGV3P03979 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRGV3P03979 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.52■□□□□ 0.24
TRGV3P03979 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRGV3P03979 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.52■□□□□ 0.24
TRGV3P03979 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.52■□□□□ 0.24
TRGV3P03979 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
TRGV3P03979 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRGV3P03979 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRGV3P03979 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRGV3P03979 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRGV3P03979 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.52■□□□□ 0.23
TRGV3P03979 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV3P03979 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.51■□□□□ 0.23
TRGV3P03979 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV3P03979 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV3P03979 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV3P03979 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV3P03979 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
TRGV3P03979 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.51■□□□□ 0.23
TRGV3P03979 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.51■□□□□ 0.23
TRGV3P03979 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.51■□□□□ 0.23
TRGV3P03979 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV3P03979 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV3P03979 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV3P03979 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.51■□□□□ 0.23
TRGV3P03979 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV3P03979 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV3P03979 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TRGV3P03979 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV3P03979 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC16.5■□□□□ 0.23
TRGV3P03979 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV3P03979 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV3P03979 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC16.5■□□□□ 0.23
TRGV3P03979 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV3P03979 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.5■□□□□ 0.23
TRGV3P03979 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV3P03979 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
TRGV3P03979 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.5■□□□□ 0.23
TRGV3P03979 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TRGV3P03979 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV3P03979 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.5■□□□□ 0.23
TRGV3P03979 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.5■□□□□ 0.23
TRGV3P03979 NTF6G-201ENST00000591094 616 ntBASIC16.5■□□□□ 0.23
TRGV3P03979 ANKRD20A6P-201ENST00000618763 204 ntBASIC16.5■□□□□ 0.23
TRGV3P03979 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TRGV3P03979 EFS-203ENST00000429593 2610 ntTSL 2 BASIC16.5■□□□□ 0.23
TRGV3P03979 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV3P03979 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV3P03979 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV3P03979 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV3P03979 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.5■□□□□ 0.23
TRGV3P03979 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV3P03979 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV3P03979 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.49■□□□□ 0.23
TRGV3P03979 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV3P03979 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV3P03979 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV3P03979 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.49■□□□□ 0.23
TRGV3P03979 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV3P03979 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV3P03979 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV3P03979 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV3P03979 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.49■□□□□ 0.23
TRGV3P03979 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.49■□□□□ 0.23
TRGV3P03979 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.49■□□□□ 0.23
TRGV3P03979 EEF1DP3-203ENST00000566025 782 ntBASIC16.49■□□□□ 0.23
TRGV3P03979 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.49■□□□□ 0.23
TRGV3P03979 AC053503.5-201ENST00000601508 636 ntBASIC16.49■□□□□ 0.23
TRGV3P03979 AC104187.1-201ENST00000607510 612 ntBASIC16.49■□□□□ 0.23
TRGV3P03979 AC004854.2-201ENST00000608450 1441 ntBASIC16.49■□□□□ 0.23
TRGV3P03979 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.49■□□□□ 0.23
TRGV3P03979 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.49■□□□□ 0.23
TRGV3P03979 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
TRGV3P03979 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV3P03979 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV3P03979 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.49■□□□□ 0.23
TRGV3P03979 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV3P03979 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.49■□□□□ 0.23
TRGV3P03979 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV3P03979 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV3P03979 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV3P03979 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.48■□□□□ 0.23
TRGV3P03979 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV3P03979 AC244015.2-201ENST00000616358 1861 ntBASIC16.48■□□□□ 0.23
TRGV3P03979 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV3P03979 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV3P03979 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV3P03979 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.48■□□□□ 0.23
TRGV3P03979 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV3P03979 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV3P03979 KRT19P1-201ENST00000405746 1186 ntBASIC16.48■□□□□ 0.23
TRGV3P03979 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.48■□□□□ 0.23
TRGV3P03979 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.48■□□□□ 0.23
TRGV3P03979 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms