Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN1O95832 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN1O95832 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.76■□□□□ 0.59
CLDN1O95832 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN1O95832 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CLDN1O95832 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN1O95832 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN1O95832 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CLDN1O95832 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN1O95832 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN1O95832 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN1O95832 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN1O95832 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CLDN1O95832 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN1O95832 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN1O95832 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.75■□□□□ 0.59
CLDN1O95832 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.75■□□□□ 0.59
CLDN1O95832 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.75■□□□□ 0.59
CLDN1O95832 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.75■□□□□ 0.59
CLDN1O95832 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.75■□□□□ 0.59
CLDN1O95832 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.75■□□□□ 0.59
CLDN1O95832 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.75■□□□□ 0.59
CLDN1O95832 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN1O95832 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN1O95832 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN1O95832 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN1O95832 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.74■□□□□ 0.59
CLDN1O95832 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN1O95832 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.74■□□□□ 0.59
CLDN1O95832 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN1O95832 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN1O95832 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN1O95832 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN1O95832 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN1O95832 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.74■□□□□ 0.59
CLDN1O95832 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.74■□□□□ 0.59
CLDN1O95832 KRT18P21-201ENST00000515767 1272 ntBASIC18.74■□□□□ 0.59
CLDN1O95832 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN1O95832 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.74■□□□□ 0.59
CLDN1O95832 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.74■□□□□ 0.59
CLDN1O95832 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CLDN1O95832 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN1O95832 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN1O95832 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
CLDN1O95832 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN1O95832 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN1O95832 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN1O95832 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CLDN1O95832 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN1O95832 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN1O95832 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.73■□□□□ 0.59
CLDN1O95832 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN1O95832 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN1O95832 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN1O95832 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN1O95832 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN1O95832 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN1O95832 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.73■□□□□ 0.59
CLDN1O95832 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CLDN1O95832 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.73■□□□□ 0.59
CLDN1O95832 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.73■□□□□ 0.59
CLDN1O95832 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CLDN1O95832 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CLDN1O95832 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.73■□□□□ 0.59
CLDN1O95832 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN1O95832 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN1O95832 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN1O95832 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.72■□□□□ 0.59
CLDN1O95832 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN1O95832 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN1O95832 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN1O95832 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.72■□□□□ 0.59
CLDN1O95832 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.72■□□□□ 0.59
CLDN1O95832 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.72■□□□□ 0.59
CLDN1O95832 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.72■□□□□ 0.59
CLDN1O95832 LINC01023-201ENST00000606054 436 ntBASIC18.72■□□□□ 0.59
CLDN1O95832 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN1O95832 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN1O95832 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN1O95832 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CLDN1O95832 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN1O95832 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.71■□□□□ 0.59
CLDN1O95832 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN1O95832 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN1O95832 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN1O95832 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN1O95832 C9orf163-202ENST00000624034 2573 ntBASIC18.71■□□□□ 0.59
CLDN1O95832 AL353803.4-201ENST00000565882 1934 ntBASIC18.71■□□□□ 0.59
CLDN1O95832 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN1O95832 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CLDN1O95832 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN1O95832 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN1O95832 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CLDN1O95832 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.71■□□□□ 0.59
CLDN1O95832 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CLDN1O95832 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.71■□□□□ 0.59
CLDN1O95832 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.71■□□□□ 0.59
CLDN1O95832 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.71■□□□□ 0.59
CLDN1O95832 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CLDN1O95832 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms