Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDRT1O95170 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDRT1O95170 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDRT1O95170 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDRT1O95170 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.69■□□□□ 0.58
CDRT1O95170 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.69■□□□□ 0.58
CDRT1O95170 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDRT1O95170 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDRT1O95170 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDRT1O95170 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.69■□□□□ 0.58
CDRT1O95170 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDRT1O95170 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDRT1O95170 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.69■□□□□ 0.58
CDRT1O95170 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDRT1O95170 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.69■□□□□ 0.58
CDRT1O95170 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDRT1O95170 AC239859.2-201ENST00000444165 318 ntBASIC18.69■□□□□ 0.58
CDRT1O95170 AC079089.2-201ENST00000531211 1277 ntBASIC18.69■□□□□ 0.58
CDRT1O95170 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDRT1O95170 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDRT1O95170 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDRT1O95170 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CDRT1O95170 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDRT1O95170 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDRT1O95170 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.69■□□□□ 0.58
CDRT1O95170 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.69■□□□□ 0.58
CDRT1O95170 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDRT1O95170 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDRT1O95170 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDRT1O95170 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.68■□□□□ 0.58
CDRT1O95170 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.68■□□□□ 0.58
CDRT1O95170 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDRT1O95170 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CDRT1O95170 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDRT1O95170 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDRT1O95170 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
CDRT1O95170 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDRT1O95170 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDRT1O95170 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.68■□□□□ 0.58
CDRT1O95170 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDRT1O95170 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.68■□□□□ 0.58
CDRT1O95170 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDRT1O95170 TSPY9P-201ENST00000440215 945 ntBASIC18.68■□□□□ 0.58
CDRT1O95170 TSPY11P-201ENST00000442607 1045 ntBASIC18.68■□□□□ 0.58
CDRT1O95170 AC010997.5-201ENST00000609182 354 ntBASIC18.68■□□□□ 0.58
CDRT1O95170 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CDRT1O95170 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDRT1O95170 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDRT1O95170 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDRT1O95170 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDRT1O95170 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CDRT1O95170 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDRT1O95170 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDRT1O95170 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDRT1O95170 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.67■□□□□ 0.58
CDRT1O95170 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDRT1O95170 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDRT1O95170 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDRT1O95170 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDRT1O95170 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDRT1O95170 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.67■□□□□ 0.58
CDRT1O95170 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
CDRT1O95170 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.67■□□□□ 0.58
CDRT1O95170 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.67■□□□□ 0.58
CDRT1O95170 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDRT1O95170 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.67■□□□□ 0.58
CDRT1O95170 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDRT1O95170 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.67■□□□□ 0.58
CDRT1O95170 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
CDRT1O95170 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDRT1O95170 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDRT1O95170 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.67■□□□□ 0.58
CDRT1O95170 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CDRT1O95170 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDRT1O95170 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CDRT1O95170 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDRT1O95170 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDRT1O95170 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CDRT1O95170 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CDRT1O95170 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.66■□□□□ 0.58
CDRT1O95170 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDRT1O95170 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDRT1O95170 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDRT1O95170 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.66■□□□□ 0.58
CDRT1O95170 RARRES2P1-201ENST00000474487 481 ntBASIC18.66■□□□□ 0.58
CDRT1O95170 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.66■□□□□ 0.58
CDRT1O95170 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CDRT1O95170 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDRT1O95170 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDRT1O95170 AC006128.1-201ENST00000624704 1661 ntBASIC18.66■□□□□ 0.58
CDRT1O95170 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CDRT1O95170 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDRT1O95170 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDRT1O95170 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDRT1O95170 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDRT1O95170 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.65■□□□□ 0.58
CDRT1O95170 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
CDRT1O95170 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
CDRT1O95170 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
CDRT1O95170 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms