Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
UBE4BO95155 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.06■■□□□ 1.28
UBE4BO95155 TESC-206ENST00000541210 936 ntTSL 3 BASIC23.06■■□□□ 1.28
UBE4BO95155 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.06■■□□□ 1.28
UBE4BO95155 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.06■■□□□ 1.28
UBE4BO95155 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
UBE4BO95155 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC23.06■■□□□ 1.28
UBE4BO95155 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
UBE4BO95155 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
UBE4BO95155 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.05■■□□□ 1.28
UBE4BO95155 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
UBE4BO95155 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
UBE4BO95155 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
UBE4BO95155 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
UBE4BO95155 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.05■■□□□ 1.28
UBE4BO95155 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
UBE4BO95155 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.05■■□□□ 1.28
UBE4BO95155 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
UBE4BO95155 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.05■■□□□ 1.28
UBE4BO95155 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC23.05■■□□□ 1.28
UBE4BO95155 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.05■■□□□ 1.28
UBE4BO95155 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
UBE4BO95155 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
UBE4BO95155 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
UBE4BO95155 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
UBE4BO95155 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
UBE4BO95155 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
UBE4BO95155 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
UBE4BO95155 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
UBE4BO95155 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
UBE4BO95155 AL049796.1-201ENST00000565336 1766 ntBASIC23.04■■□□□ 1.28
UBE4BO95155 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
UBE4BO95155 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
UBE4BO95155 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC23.04■■□□□ 1.28
UBE4BO95155 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
UBE4BO95155 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.04■■□□□ 1.28
UBE4BO95155 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC23.04■■□□□ 1.28
UBE4BO95155 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
UBE4BO95155 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
UBE4BO95155 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
UBE4BO95155 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
UBE4BO95155 KRT16P2-201ENST00000414673 1423 ntBASIC23.03■■□□□ 1.28
UBE4BO95155 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
UBE4BO95155 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC23.03■■□□□ 1.28
UBE4BO95155 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC23.03■■□□□ 1.28
UBE4BO95155 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
UBE4BO95155 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.03■■□□□ 1.28
UBE4BO95155 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.03■■□□□ 1.28
UBE4BO95155 RARRES2P6-201ENST00000567333 442 ntBASIC23.03■■□□□ 1.28
UBE4BO95155 KRT18P61-201ENST00000585825 1298 ntBASIC23.03■■□□□ 1.28
UBE4BO95155 AP001160.3-201ENST00000601484 763 ntBASIC23.03■■□□□ 1.28
UBE4BO95155 AC087623.3-201ENST00000607047 1098 ntBASIC23.03■■□□□ 1.28
UBE4BO95155 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.03■■□□□ 1.28
UBE4BO95155 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
UBE4BO95155 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
UBE4BO95155 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
UBE4BO95155 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
UBE4BO95155 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.02■■□□□ 1.28
UBE4BO95155 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
UBE4BO95155 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
UBE4BO95155 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
UBE4BO95155 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
UBE4BO95155 NAA20-201ENST00000310450 920 ntTSL 2 BASIC23.02■■□□□ 1.28
UBE4BO95155 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
UBE4BO95155 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
UBE4BO95155 AC026271.2-201ENST00000428091 497 ntBASIC23.02■■□□□ 1.28
UBE4BO95155 KRT18P20-201ENST00000548986 1279 ntBASIC23.02■■□□□ 1.28
UBE4BO95155 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.02■■□□□ 1.28
UBE4BO95155 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.02■■□□□ 1.28
UBE4BO95155 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
UBE4BO95155 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC23.02■■□□□ 1.28
UBE4BO95155 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
UBE4BO95155 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.02■■□□□ 1.27
UBE4BO95155 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
UBE4BO95155 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
UBE4BO95155 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
UBE4BO95155 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
UBE4BO95155 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
UBE4BO95155 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
UBE4BO95155 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
UBE4BO95155 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
UBE4BO95155 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.01■■□□□ 1.27
UBE4BO95155 KRT19P1-201ENST00000405746 1186 ntBASIC23.01■■□□□ 1.27
UBE4BO95155 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
UBE4BO95155 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.01■■□□□ 1.27
UBE4BO95155 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.01■■□□□ 1.27
UBE4BO95155 AC120498.10-201ENST00000621827 505 ntBASIC23.01■■□□□ 1.27
UBE4BO95155 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.01■■□□□ 1.27
UBE4BO95155 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
UBE4BO95155 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.01■■□□□ 1.27
UBE4BO95155 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
UBE4BO95155 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
UBE4BO95155 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC23■■□□□ 1.27
UBE4BO95155 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23■■□□□ 1.27
UBE4BO95155 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23■■□□□ 1.27
UBE4BO95155 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC23■■□□□ 1.27
UBE4BO95155 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
UBE4BO95155 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
UBE4BO95155 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
UBE4BO95155 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms