Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE3O75131 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE3O75131 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CPNE3O75131 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CPNE3O75131 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE3O75131 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE3O75131 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE3O75131 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.12■□□□□ 0.81
CPNE3O75131 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.12■□□□□ 0.81
CPNE3O75131 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE3O75131 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CPNE3O75131 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.12■□□□□ 0.81
CPNE3O75131 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.12■□□□□ 0.81
CPNE3O75131 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
CPNE3O75131 SLC7A5P1-201ENST00000568957 537 ntBASIC20.12■□□□□ 0.81
CPNE3O75131 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.12■□□□□ 0.81
CPNE3O75131 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.12■□□□□ 0.81
CPNE3O75131 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE3O75131 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE3O75131 AL050303.2-201ENST00000619798 666 ntBASIC20.12■□□□□ 0.81
CPNE3O75131 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE3O75131 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.12■□□□□ 0.81
CPNE3O75131 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE3O75131 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CPNE3O75131 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE3O75131 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE3O75131 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CPNE3O75131 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE3O75131 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE3O75131 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE3O75131 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.11■□□□□ 0.81
CPNE3O75131 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.11■□□□□ 0.81
CPNE3O75131 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.11■□□□□ 0.81
CPNE3O75131 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPNE3O75131 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CPNE3O75131 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CPNE3O75131 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPNE3O75131 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPNE3O75131 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.11■□□□□ 0.81
CPNE3O75131 AC008175.2-201ENST00000612840 297 ntBASIC20.11■□□□□ 0.81
CPNE3O75131 AC120498.10-201ENST00000621827 505 ntBASIC20.11■□□□□ 0.81
CPNE3O75131 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CPNE3O75131 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CPNE3O75131 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPNE3O75131 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CPNE3O75131 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPNE3O75131 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.1■□□□□ 0.81
CPNE3O75131 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CPNE3O75131 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPNE3O75131 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPNE3O75131 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CPNE3O75131 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPNE3O75131 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.1■□□□□ 0.81
CPNE3O75131 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.1■□□□□ 0.81
CPNE3O75131 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.1■□□□□ 0.81
CPNE3O75131 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.1■□□□□ 0.81
CPNE3O75131 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CPNE3O75131 AC013268.1-206ENST00000638368 961 ntBASIC20.1■□□□□ 0.81
CPNE3O75131 AC112229.1-201ENST00000639295 961 ntBASIC20.1■□□□□ 0.81
CPNE3O75131 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CPNE3O75131 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CPNE3O75131 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPNE3O75131 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPNE3O75131 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE3O75131 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE3O75131 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE3O75131 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CPNE3O75131 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE3O75131 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE3O75131 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE3O75131 CNN2P6-201ENST00000439038 900 ntBASIC20.09■□□□□ 0.81
CPNE3O75131 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.09■□□□□ 0.81
CPNE3O75131 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE3O75131 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.09■□□□□ 0.81
CPNE3O75131 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.09■□□□□ 0.81
CPNE3O75131 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
CPNE3O75131 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE3O75131 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE3O75131 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE3O75131 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPNE3O75131 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CPNE3O75131 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPNE3O75131 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPNE3O75131 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.08■□□□□ 0.81
CPNE3O75131 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPNE3O75131 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPNE3O75131 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CPNE3O75131 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPNE3O75131 AC083906.2-201ENST00000511578 360 ntBASIC20.08■□□□□ 0.81
CPNE3O75131 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.08■□□□□ 0.81
CPNE3O75131 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CPNE3O75131 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
CPNE3O75131 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CPNE3O75131 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CPNE3O75131 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
CPNE3O75131 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE3O75131 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE3O75131 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CPNE3O75131 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE3O75131 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms