Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF4O60810 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.26■□□□□ 0.83
PRAMEF4O60810 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF4O60810 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF4O60810 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.26■□□□□ 0.83
PRAMEF4O60810 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF4O60810 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF4O60810 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF4O60810 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF4O60810 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.26■□□□□ 0.83
PRAMEF4O60810 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF4O60810 AC079140.4-201ENST00000507448 529 ntBASIC20.26■□□□□ 0.83
PRAMEF4O60810 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.26■□□□□ 0.83
PRAMEF4O60810 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.26■□□□□ 0.83
PRAMEF4O60810 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF4O60810 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.26■□□□□ 0.83
PRAMEF4O60810 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.26■□□□□ 0.83
PRAMEF4O60810 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF4O60810 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF4O60810 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.26■□□□□ 0.83
PRAMEF4O60810 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.26■□□□□ 0.83
PRAMEF4O60810 AC061975.6-201ENST00000579045 1553 ntBASIC20.25■□□□□ 0.83
PRAMEF4O60810 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF4O60810 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF4O60810 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF4O60810 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.25■□□□□ 0.83
PRAMEF4O60810 CCDC92B-201ENST00000575506 885 ntBASIC20.25■□□□□ 0.83
PRAMEF4O60810 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.25■□□□□ 0.83
PRAMEF4O60810 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF4O60810 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF4O60810 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.24■□□□□ 0.83
PRAMEF4O60810 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEF4O60810 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEF4O60810 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PRAMEF4O60810 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEF4O60810 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEF4O60810 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.24■□□□□ 0.83
PRAMEF4O60810 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.24■□□□□ 0.83
PRAMEF4O60810 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEF4O60810 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEF4O60810 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEF4O60810 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PRAMEF4O60810 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PRAMEF4O60810 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.24■□□□□ 0.83
PRAMEF4O60810 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEF4O60810 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
PRAMEF4O60810 KRT87P-202ENST00000534226 1464 ntBASIC20.24■□□□□ 0.83
PRAMEF4O60810 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.23■□□□□ 0.83
PRAMEF4O60810 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.23■□□□□ 0.83
PRAMEF4O60810 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.23■□□□□ 0.83
PRAMEF4O60810 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.23■□□□□ 0.83
PRAMEF4O60810 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.23■□□□□ 0.83
PRAMEF4O60810 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF4O60810 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.23■□□□□ 0.83
PRAMEF4O60810 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PRAMEF4O60810 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF4O60810 KRT18P61-201ENST00000585825 1298 ntBASIC20.23■□□□□ 0.83
PRAMEF4O60810 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.23■□□□□ 0.83
PRAMEF4O60810 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.23■□□□□ 0.83
PRAMEF4O60810 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF4O60810 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PRAMEF4O60810 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
PRAMEF4O60810 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF4O60810 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PRAMEF4O60810 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF4O60810 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
PRAMEF4O60810 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF4O60810 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF4O60810 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF4O60810 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PRAMEF4O60810 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.22■□□□□ 0.83
PRAMEF4O60810 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF4O60810 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.22■□□□□ 0.83
PRAMEF4O60810 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF4O60810 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF4O60810 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF4O60810 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PRAMEF4O60810 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF4O60810 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF4O60810 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PRAMEF4O60810 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF4O60810 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF4O60810 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.21■□□□□ 0.83
PRAMEF4O60810 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF4O60810 KRT18P14-201ENST00000534205 1250 ntBASIC20.21■□□□□ 0.83
PRAMEF4O60810 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF4O60810 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PRAMEF4O60810 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.21■□□□□ 0.83
PRAMEF4O60810 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.21■□□□□ 0.83
PRAMEF4O60810 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF4O60810 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
PRAMEF4O60810 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
PRAMEF4O60810 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.2■□□□□ 0.82
PRAMEF4O60810 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.2■□□□□ 0.82
PRAMEF4O60810 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF4O60810 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF4O60810 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.2■□□□□ 0.82
PRAMEF4O60810 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.2■□□□□ 0.82
PRAMEF4O60810 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.2■□□□□ 0.82
PRAMEF4O60810 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms